RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 SSH3Q8TE77 659 aa30.51■■■□□ 2.48
CTF1-202ENST00000395019 ARXQ96QS3 562 aa30.51■■■□□ 2.48
CTF1-202ENST00000395019 SRP68Q9UHB9 627 aaKnown RBP30.51■■■□□ 2.47
CTF1-202ENST00000395019 SSFA2P28290 1259 aa30.5■■■□□ 2.47
CTF1-202ENST00000395019 POLA2Q14181 598 aa30.5■■■□□ 2.47
CTF1-202ENST00000395019 DZIP3Q86Y13 1208 aaKnown RBP30.5■■■□□ 2.47
CTF1-202ENST00000395019 PDGFDQ9GZP0 370 aaPredicted RBP30.5■■■□□ 2.47
CTF1-202ENST00000395019 MTX1Q13505 466 aa30.49■■■□□ 2.47
CTF1-202ENST00000395019 TRAPPC3LQ5T215 181 aa30.49■■■□□ 2.47
CTF1-202ENST00000395019 PPP1R42Q7Z4L9 355 aa30.49■■■□□ 2.47
CTF1-202ENST00000395019 COL23A1Q86Y22 540 aaPredicted RBP30.49■■■□□ 2.47
CTF1-202ENST00000395019 ZBTB3Q9H5J0 574 aa30.49■■■□□ 2.47
CTF1-202ENST00000395019 SOCS7O14512 581 aa30.47■■■□□ 2.47
CTF1-202ENST00000395019 C8orf34Q49A92 452 aa30.47■■■□□ 2.47
CTF1-202ENST00000395019 ANKRD36CQ5JPF3 1778 aa30.47■■■□□ 2.47
CTF1-202ENST00000395019 CAMTA2O94983 1202 aa30.47■■■□□ 2.47
CTF1-202ENST00000395019 HMGB2P26583 209 aaKnown RBP30.47■■■□□ 2.47
CTF1-202ENST00000395019 ZBTB47Q9UFB7 747 aaPredicted RBP30.47■■■□□ 2.47
CTF1-202ENST00000395019 HLFQ16534 295 aa30.46■■■□□ 2.47
CTF1-202ENST00000395019 SUCLG2Q96I99 432 aa30.46■■■□□ 2.47
CTF1-202ENST00000395019 MAP3K15Q6ZN16 1313 aa30.46■■■□□ 2.47
CTF1-202ENST00000395019 CASZ1Q86V15 1759 aa30.45■■■□□ 2.47
CTF1-202ENST00000395019 ATP5J2-PTCD1G3V325 749 aa30.45■■■□□ 2.47
CTF1-202ENST00000395019 ADRA2BP18089 450 aa30.45■■■□□ 2.47
CTF1-202ENST00000395019 KIF6Q6ZMV9 814 aa30.45■■■□□ 2.47
CTF1-202ENST00000395019 AFDNP55196 1824 aaKnown RBP30.45■■■□□ 2.47
CTF1-202ENST00000395019 SRGAP3O43295 1099 aa30.44■■■□□ 2.46
CTF1-202ENST00000395019 KAZALD1Q96I82 304 aa30.44■■■□□ 2.46
CTF1-202ENST00000395019 BCL2L12Q9HB09 334 aa30.44■■■□□ 2.46
CTF1-202ENST00000395019 USP42Q9H9J4 1324 aaKnown RBP30.44■■■□□ 2.46
CTF1-202ENST00000395019 RFC4P35249 363 aa30.44■■■□□ 2.46
CTF1-202ENST00000395019 USPL1Q5W0Q7 1092 aa30.44■■■□□ 2.46
CTF1-202ENST00000395019 NPM2Q86SE8 214 aaKnown RBP30.44■■■□□ 2.46
CTF1-202ENST00000395019 A0A087WZG4 1122 aa30.43■■■□□ 2.46
CTF1-202ENST00000395019 NARFQ9UHQ1 456 aa30.43■■■□□ 2.46
CTF1-202ENST00000395019 EXOC6BQ9Y2D4 811 aa30.43■■■□□ 2.46
CTF1-202ENST00000395019 R3HDM1Q15032 1099 aaKnown RBP30.42■■■□□ 2.46
CTF1-202ENST00000395019 CCDC191Q8NCU4 936 aa30.41■■■□□ 2.46
CTF1-202ENST00000395019 MSH5O43196 834 aa30.4■■■□□ 2.46
CTF1-202ENST00000395019 TCIRG1Q13488 830 aa30.4■■■□□ 2.46
CTF1-202ENST00000395019 ISCA1Q9BUE6 129 aa30.4■■■□□ 2.46
CTF1-202ENST00000395019 CWC25Q9NXE8 425 aaPredicted RBP30.4■■■□□ 2.46
CTF1-202ENST00000395019 PSDA5PKW4 1024 aaPredicted RBP30.4■■■□□ 2.46
CTF1-202ENST00000395019 BICC1Q9H694 974 aaKnown RBP30.4■■■□□ 2.46
CTF1-202ENST00000395019 RAB11FIP3O75154 756 aa30.39■■■□□ 2.46
CTF1-202ENST00000395019 CASP7P55210 303 aa30.39■■■□□ 2.46
CTF1-202ENST00000395019 TRIM28Q13263 835 aaKnown RBP30.39■■■□□ 2.46
CTF1-202ENST00000395019 H7C1W4 665 aa30.38■■■□□ 2.45
CTF1-202ENST00000395019 APBB1O00213 710 aa30.38■■■□□ 2.45
CTF1-202ENST00000395019 ZPR1O75312 459 aa30.38■■■□□ 2.45
CTF1-202ENST00000395019 LRRCC1Q9C099 1032 aa30.38■■■□□ 2.45
CTF1-202ENST00000395019 ERVV-1B6SEH8 477 aa30.37■■■□□ 2.45
CTF1-202ENST00000395019 SMARCA5O60264 1052 aaPredicted RBP30.37■■■□□ 2.45
CTF1-202ENST00000395019 GYS1P13807 737 aa30.37■■■□□ 2.45
CTF1-202ENST00000395019 GIGYF2Q6Y7W6 1299 aaKnown RBP30.37■■■□□ 2.45
CTF1-202ENST00000395019 FLAD1Q8NFF5 587 aa30.37■■■□□ 2.45
CTF1-202ENST00000395019 SURF6O75683 361 aaKnown RBP30.36■■■□□ 2.45
CTF1-202ENST00000395019 UBE3BQ7Z3V4 1068 aa30.36■■■□□ 2.45
CTF1-202ENST00000395019 PLEKHM2Q8IWE5 1019 aa30.36■■■□□ 2.45
CTF1-202ENST00000395019 NOP58Q9Y2X3 529 aaKnown RBP30.36■■■□□ 2.45
CTF1-202ENST00000395019 HSP90AB4PQ58FF6 505 aa30.35■■■□□ 2.45
CTF1-202ENST00000395019 HSP90AB3PQ58FF7 597 aa30.35■■■□□ 2.45
CTF1-202ENST00000395019 C16orf71Q8IYS4 520 aaPredicted RBP30.35■■■□□ 2.45
CTF1-202ENST00000395019 COL24A1Q17RW2 1714 aa30.34■■■□□ 2.45
CTF1-202ENST00000395019 BMP2KLQ5H9B9 411 aa30.33■■■□□ 2.45
CTF1-202ENST00000395019 EPHA10Q5JZY3 1008 aa30.33■■■□□ 2.45
CTF1-202ENST00000395019 TBC1D9BQ66K14 1250 aa30.33■■■□□ 2.45
CTF1-202ENST00000395019 MSL1Q68DK7 614 aa30.33■■■□□ 2.45
CTF1-202ENST00000395019 GPTP24298 496 aa30.33■■■□□ 2.45
CTF1-202ENST00000395019 RABL6Q3YEC7 729 aaPredicted RBP30.33■■■□□ 2.45
CTF1-202ENST00000395019 JARID2Q92833 1246 aaPredicted RBP30.32■■■□□ 2.44
CTF1-202ENST00000395019 UBN2Q6ZU65 1347 aa30.31■■■□□ 2.44
CTF1-202ENST00000395019 BICDL1Q6ZP65 573 aa30.3■■■□□ 2.44
CTF1-202ENST00000395019 OTUD7AQ8TE49 926 aaPredicted RBP30.3■■■□□ 2.44
CTF1-202ENST00000395019 CLEC4GQ6UXB4 293 aa30.29■■■□□ 2.44
CTF1-202ENST00000395019 KIF1BPQ96EK5 621 aa30.29■■■□□ 2.44
CTF1-202ENST00000395019 ZNF34Q8IZ26 560 aa30.29■■■□□ 2.44
CTF1-202ENST00000395019 RHPN1Q8TCX5 695 aa30.29■■■□□ 2.44
CTF1-202ENST00000395019 ZNF652Q9Y2D9 606 aa30.29■■■□□ 2.44
CTF1-202ENST00000395019 NFIXQ14938 502 aa30.27■■■□□ 2.44
CTF1-202ENST00000395019 OSBPL3Q9H4L5 887 aa30.27■■■□□ 2.44
CTF1-202ENST00000395019 NIP7Q9Y221 180 aaKnown RBP eCLIP30.27■■■□□ 2.44
CTF1-202ENST00000395019 SALL3Q9BXA9 1300 aa30.27■■■□□ 2.44
CTF1-202ENST00000395019 FOXO4P98177 505 aa30.26■■■□□ 2.44
CTF1-202ENST00000395019 RGL2O15211 777 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 ZBTB7AO95365 584 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 PCCAP05165 728 aaPredicted RBP30.25■■■□□ 2.43
CTF1-202ENST00000395019 TTC22Q5TAA0 569 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 ERC1Q8IUD2 1116 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 PA2G4Q9UQ80 394 aaKnown RBP30.25■■■□□ 2.43
CTF1-202ENST00000395019 NLRP10Q86W26 655 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 BCL11AQ9H165 835 aa30.25■■■□□ 2.43
CTF1-202ENST00000395019 TM4SF1P30408 202 aa30.24■■■□□ 2.43
CTF1-202ENST00000395019 DDR1Q08345 913 aa30.24■■■□□ 2.43
CTF1-202ENST00000395019 OS9Q13438 667 aaPredicted RBP30.24■■■□□ 2.43
CTF1-202ENST00000395019 FAM177BA6PVY3 158 aa30.23■■■□□ 2.43
CTF1-202ENST00000395019 RFX5P48382 616 aaPredicted RBP30.23■■■□□ 2.43
CTF1-202ENST00000395019 PDE1AP54750 535 aa30.23■■■□□ 2.43
CTF1-202ENST00000395019 ZBTB38Q8NAP3 1195 aaPredicted RBP30.23■■■□□ 2.43
CTF1-202ENST00000395019 COPRSQ9NQ92 184 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms