RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 NPHP3Q7Z494 1330 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 DDX41Q9UJV9 622 aaKnown RBP19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 ITSN1Q15811 1721 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 BLOC1S2Q6QNY1 142 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 FILIP1Q7Z7B0 1213 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 AACSQ86V21 672 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 TDRD7Q8NHU6 1098 aaKnown RBP19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
EFEMP1-202ENST00000394555 NMIQ13287 307 aaPredicted RBP19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 A0A087WWV3 80 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 SLC27A2O14975 620 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 FBXW7Q969H0 707 aa19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
EFEMP1-202ENST00000394555 FOSBP53539 338 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 KIF18AQ8NI77 898 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 GPATCH3Q96I76 525 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 ZNF215Q9UL58 517 aaPredicted RBP19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 FLT4P35916 1363 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 PSMA5P28066 241 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 USHBP1Q8N6Y0 703 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 SYCP1Q15431 976 aa19.38■□□□□ 0.69
EFEMP1-202ENST00000394555 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 ROBO2Q9HCK4 1378 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 JAK2O60674 1132 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 BEND3Q5T5X7 828 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 EVI5LQ96CN4 794 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 CCDC8Q9H0W5 538 aaPredicted RBP19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 USP6P35125 1406 aa19.37■□□□□ 0.69
EFEMP1-202ENST00000394555 SKILP12757 684 aa19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 NGDNQ8NEJ9 315 aaKnown RBP19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 MAP4K1Q92918 833 aa19.36■□□□□ 0.69
EFEMP1-202ENST00000394555 BOLA2Q9H3K6 86 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 KDRP35968 1356 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 H3BQV1 296 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 GABPB1Q06547 395 aaPredicted RBP19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 C11orf57Q6ZUT1 292 aaPredicted RBP19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 KCNB2Q92953 911 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 SETD1AO15047 1707 aaKnown RBP19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 A0A0D9SFI3 127 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 PLEKHG3A1L390 1219 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 BECN2A8MW95 431 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
EFEMP1-202ENST00000394555 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 MORC2Q9Y6X9 1032 aaPredicted RBP19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 ZBTB22O15209 634 aa19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 TOB2Q14106 344 aaPredicted RBP19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 ELF2Q15723 593 aa19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 RNF20Q5VTR2 975 aa19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 RBM43Q6ZSC3 357 aaKnown RBP19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.34■□□□□ 0.69
EFEMP1-202ENST00000394555 USP42Q9H9J4 1324 aaKnown RBP19.33■□□□□ 0.69
EFEMP1-202ENST00000394555 RPS6KB1P23443 525 aa19.33■□□□□ 0.69
EFEMP1-202ENST00000394555 ANKRD1Q15327 319 aa19.33■□□□□ 0.69
EFEMP1-202ENST00000394555 BRF1Q92994 677 aa19.33■□□□□ 0.69
EFEMP1-202ENST00000394555 KCNQ3O43525 872 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 HSP90B1P14625 803 aaKnown RBP19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 NLRP6P59044 892 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 KRT222Q8N1A0 295 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 SIL1Q9H173 461 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 ERICH4A6NGS2 130 aa19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 SYTL4Q96C24 671 aaPredicted RBP19.33■□□□□ 0.68
EFEMP1-202ENST00000394555 CCDC69A6NI79 296 aa19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 ZNF397Q8NF99 534 aaPredicted RBP19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 BBXQ8WY36 941 aaPredicted RBP19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 FTOQ9C0B1 505 aaKnown RBP eCLIP19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
EFEMP1-202ENST00000394555 IQCB1Q15051 598 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 TERF2Q15554 542 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 FBXO38Q6PIJ6 1188 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 ST7Q9NRC1 585 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 CWF19L2Q2TBE0 894 aaKnown RBP19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 SIRT1Q96EB6 747 aa19.31■□□□□ 0.68
EFEMP1-202ENST00000394555 PDIA4P13667 645 aaKnown RBP19.3■□□□□ 0.68
EFEMP1-202ENST00000394555 ZNF589Q86UQ0 364 aaPredicted RBP19.3■□□□□ 0.68
EFEMP1-202ENST00000394555 EAF2Q96CJ1 260 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms