RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DACT1Q9NYF0 836 aa18.52■□□□□ 0.56
SHANK1-204ENST00000391814 KIF5BP33176 963 aa18.52■□□□□ 0.55
SHANK1-204ENST00000391814 DESP17661 470 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 CEP83Q9Y592 693 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 CCDC85AQ96PX6 553 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-204ENST00000391814 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 N4BP3O15049 544 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 CLNS1AP54105 237 aaKnown RBP18.51■□□□□ 0.55
SHANK1-204ENST00000391814 MYRIPQ8NFW9 859 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 PSMD1Q99460 953 aa18.51■□□□□ 0.55
SHANK1-204ENST00000391814 F13A1P00488 732 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 LZTFL1Q9NQ48 299 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 TERF1P54274 439 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 ZNF569Q5MCW4 686 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 SYKP43405 635 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 FAM114A1Q8IWE2 563 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 CCDC102BQ68D86 513 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 PPP2R3AQ06190 1150 aa18.5■□□□□ 0.55
SHANK1-204ENST00000391814 SMIM23A6NLE4 172 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 CCDC40Q4G0X9 1142 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 LRP2BPQ9P2M1 347 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 FAM160A1Q05DH4 1040 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 HOMER2Q9NSB8 354 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
SHANK1-204ENST00000391814 ATF3P18847 181 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 SPTY2D1Q68D10 685 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-204ENST00000391814 TTC16Q8NEE8 873 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 MINDY4BA8MYZ0 360 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 CABP4P57796 275 aa18.49■□□□□ 0.55
SHANK1-204ENST00000391814 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
SHANK1-204ENST00000391814 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 CEP126Q9P2H0 1117 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
SHANK1-204ENST00000391814 RRAGBQ5VZM2 374 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 CPLX4Q7Z7G2 160 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 ERO1AQ96HE7 468 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 ZNF213O14771 459 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 EVCP57679 992 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 NLRP5P59047 1200 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 GABPB1Q06547 395 aaPredicted RBP18.48■□□□□ 0.55
SHANK1-204ENST00000391814 ELF2Q15723 593 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 AFMP43652 599 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 CHMP4BP1P59074 171 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 KIAA0753Q2KHM9 967 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 IFT81Q8WYA0 676 aa18.48■□□□□ 0.55
SHANK1-204ENST00000391814 NAP1L3Q99457 506 aaPredicted RBP18.48■□□□□ 0.55
SHANK1-204ENST00000391814 TRIM21P19474 475 aaKnown RBP18.47■□□□□ 0.55
SHANK1-204ENST00000391814 CTNNA2P26232 953 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 SDSP20132 328 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 RBM5P52756 815 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHANK1-204ENST00000391814 RABEP2Q9H5N1 569 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-204ENST00000391814 PTPRGP23470 1445 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 BUB1BO60566 1050 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-204ENST00000391814 TUBB4AP04350 444 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 KANK3Q6NY19 840 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
SHANK1-204ENST00000391814 USP16Q9Y5T5 823 aa18.47■□□□□ 0.55
SHANK1-204ENST00000391814 IGF1RP08069 1367 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 SEC24BO95487 1268 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 CYLC1P35663 651 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 NEK1Q96PY6 1258 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
SHANK1-204ENST00000391814 NUTM2BA6NNL0 878 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 NUTM2EB1AL46 878 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 NUTM2AQ8IVF1 878 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-204ENST00000391814 PPP1R14CQ8TAE6 165 aa18.45■□□□□ 0.54
SHANK1-204ENST00000391814 GUCA1BQ9UMX6 200 aa18.45■□□□□ 0.54
SHANK1-204ENST00000391814 A0A1B0GUA9 196 aa18.45■□□□□ 0.54
SHANK1-204ENST00000391814 MPHOSPH10O00566 681 aaKnown RBP18.45■□□□□ 0.54
SHANK1-204ENST00000391814 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
SHANK1-204ENST00000391814 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
SHANK1-204ENST00000391814 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
SHANK1-204ENST00000391814 FAM69CQ0P6D2 419 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 APBB1IPQ7Z5R6 666 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 NCOA1Q15788 1441 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 SEPT6Q14141 434 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 CTCFLQ8NI51 663 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 LMOD1P29536 600 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 IFIT3O14879 490 aaKnown RBP18.44■□□□□ 0.54
SHANK1-204ENST00000391814 SELENOOQ9BVL4 669 aa18.44■□□□□ 0.54
SHANK1-204ENST00000391814 MMRN2Q9H8L6 949 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms