RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
IGKV4-1-201ENST00000390243 SNED1Q8TER0 1413 aa22.16■■□□□ 1.14
IGKV4-1-201ENST00000390243 NFKBIEO00221 500 aa22.16■■□□□ 1.14
IGKV4-1-201ENST00000390243 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
IGKV4-1-201ENST00000390243 TPTE2Q6XPS3 522 aa22.16■■□□□ 1.14
IGKV4-1-201ENST00000390243 PLBD2Q8NHP8 589 aa22.16■■□□□ 1.14
IGKV4-1-201ENST00000390243 ATP5J2-PTCD1G3V325 749 aa22.15■■□□□ 1.14
IGKV4-1-201ENST00000390243 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
IGKV4-1-201ENST00000390243 PRPF40BQ6NWY9 871 aaKnown RBP22.15■■□□□ 1.14
IGKV4-1-201ENST00000390243 HYPKQ9NX55 129 aa22.15■■□□□ 1.14
IGKV4-1-201ENST00000390243 C21orf2O43822 256 aa22.14■■□□□ 1.13
IGKV4-1-201ENST00000390243 ANKRD13DQ6ZTN6 518 aa22.14■■□□□ 1.13
IGKV4-1-201ENST00000390243 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
IGKV4-1-201ENST00000390243 CRY2Q49AN0 593 aa22.13■■□□□ 1.13
IGKV4-1-201ENST00000390243 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
IGKV4-1-201ENST00000390243 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
IGKV4-1-201ENST00000390243 DICER1Q9UPY3 1922 aaKnown RBP22.12■■□□□ 1.13
IGKV4-1-201ENST00000390243 PARP10Q53GL7 1025 aa22.12■■□□□ 1.13
IGKV4-1-201ENST00000390243 CCDC30Q5VVM6 783 aa22.12■■□□□ 1.13
IGKV4-1-201ENST00000390243 NYXQ9GZU5 481 aa22.12■■□□□ 1.13
IGKV4-1-201ENST00000390243 CACNA1FO60840 1977 aa22.12■■□□□ 1.13
IGKV4-1-201ENST00000390243 VAMP4O75379 141 aa22.11■■□□□ 1.13
IGKV4-1-201ENST00000390243 ZNF526Q8TF50 670 aaPredicted RBP22.11■■□□□ 1.13
IGKV4-1-201ENST00000390243 HCLS1P14317 486 aaPredicted RBP22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 C7orf43Q8WVR3 580 aa22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 CDCA7LQ96GN5 454 aa22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
IGKV4-1-201ENST00000390243 LRRC37AA6NMS7 1700 aa22.09■■□□□ 1.13
IGKV4-1-201ENST00000390243 NPR1P16066 1061 aa22.09■■□□□ 1.13
IGKV4-1-201ENST00000390243 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
IGKV4-1-201ENST00000390243 MYD88Q99836 296 aa22.09■■□□□ 1.13
IGKV4-1-201ENST00000390243 COL4A5P29400 1685 aa22.09■■□□□ 1.13
IGKV4-1-201ENST00000390243 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
IGKV4-1-201ENST00000390243 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
IGKV4-1-201ENST00000390243 PPP1R42Q7Z4L9 355 aa22.08■■□□□ 1.13
IGKV4-1-201ENST00000390243 PDZRN3Q9UPQ7 1066 aa22.08■■□□□ 1.13
IGKV4-1-201ENST00000390243 RIC3Q7Z5B4 369 aa22.07■■□□□ 1.12
IGKV4-1-201ENST00000390243 JARID2Q92833 1246 aaPredicted RBP22.07■■□□□ 1.12
IGKV4-1-201ENST00000390243 CNKSR1Q969H4 720 aa22.07■■□□□ 1.12
IGKV4-1-201ENST00000390243 RNF181Q9P0P0 153 aa22.07■■□□□ 1.12
IGKV4-1-201ENST00000390243 MAP3K2Q9Y2U5 619 aa22.07■■□□□ 1.12
IGKV4-1-201ENST00000390243 IGKV5-2P06315 115 aa22.06■■□□□ 1.12
IGKV4-1-201ENST00000390243 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
IGKV4-1-201ENST00000390243 TRMT112Q9UI30 125 aaKnown RBP22.06■■□□□ 1.12
IGKV4-1-201ENST00000390243 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
IGKV4-1-201ENST00000390243 PI4KAP2A4QPH2 592 aa22.05■■□□□ 1.12
IGKV4-1-201ENST00000390243 SLC4A2P04920 1241 aa22.05■■□□□ 1.12
IGKV4-1-201ENST00000390243 SLC10A5Q5PT55 438 aa22.05■■□□□ 1.12
IGKV4-1-201ENST00000390243 PI4KAP1Q8N8J0 262 aa22.05■■□□□ 1.12
IGKV4-1-201ENST00000390243 ABCC4O15439 1325 aa22.05■■□□□ 1.12
IGKV4-1-201ENST00000390243 DUOX1Q9NRD9 1551 aa22.04■■□□□ 1.12
IGKV4-1-201ENST00000390243 FLIIQ13045 1269 aa22.04■■□□□ 1.12
IGKV4-1-201ENST00000390243 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
IGKV4-1-201ENST00000390243 MYH16Q9H6N6 1097 aa22.04■■□□□ 1.12
IGKV4-1-201ENST00000390243 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
IGKV4-1-201ENST00000390243 SPEF2Q9C093 1822 aa22.03■■□□□ 1.12
IGKV4-1-201ENST00000390243 HOXA10P31260 410 aaPredicted RBP22.03■■□□□ 1.12
IGKV4-1-201ENST00000390243 METTL22Q9BUU2 404 aaPredicted RBP22.03■■□□□ 1.12
IGKV4-1-201ENST00000390243 MYH3P11055 1940 aa22.03■■□□□ 1.12
IGKV4-1-201ENST00000390243 LTBP1Q14766 1721 aa22.03■■□□□ 1.12
IGKV4-1-201ENST00000390243 SLFN5Q08AF3 891 aa22.02■■□□□ 1.12
IGKV4-1-201ENST00000390243 CWF19L2Q2TBE0 894 aaKnown RBP22.02■■□□□ 1.12
IGKV4-1-201ENST00000390243 TRIM28Q13263 835 aaKnown RBP22.01■■□□□ 1.11
IGKV4-1-201ENST00000390243 KSR2Q6VAB6 950 aa22.01■■□□□ 1.11
IGKV4-1-201ENST00000390243 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
IGKV4-1-201ENST00000390243 F6X3S4 739 aa22■■□□□ 1.11
IGKV4-1-201ENST00000390243 LMNB1P20700 586 aa22■■□□□ 1.11
IGKV4-1-201ENST00000390243 LTBP3Q9NS15 1303 aa22■■□□□ 1.11
IGKV4-1-201ENST00000390243 CCDC93Q567U6 631 aa21.99■■□□□ 1.11
IGKV4-1-201ENST00000390243 NLRP3Q96P20 1036 aa21.99■■□□□ 1.11
IGKV4-1-201ENST00000390243 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
IGKV4-1-201ENST00000390243 NMRK2Q9NPI5 230 aa21.99■■□□□ 1.11
IGKV4-1-201ENST00000390243 IRS4O14654 1257 aaPredicted RBP21.98■■□□□ 1.11
IGKV4-1-201ENST00000390243 PPEF1O14829 653 aaPredicted RBP21.98■■□□□ 1.11
IGKV4-1-201ENST00000390243 CRAMP1Q96RY5 1269 aa21.98■■□□□ 1.11
IGKV4-1-201ENST00000390243 NEURL1BA8MQ27 555 aa21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 E9PSI1 815 aa21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 KIF3CO14782 793 aa21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 DDX58O95786 925 aaKnown RBP21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 FKBP5Q13451 457 aaPredicted RBP21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 ZBTB38Q8NAP3 1195 aaPredicted RBP21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
IGKV4-1-201ENST00000390243 CCDC191Q8NCU4 936 aa21.96■■□□□ 1.11
IGKV4-1-201ENST00000390243 RBM17Q96I25 401 aaKnown RBP21.96■■□□□ 1.11
IGKV4-1-201ENST00000390243 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
IGKV4-1-201ENST00000390243 GPBP1L1Q9HC44 474 aaPredicted RBP21.96■■□□□ 1.11
IGKV4-1-201ENST00000390243 CWC25Q9NXE8 425 aaPredicted RBP21.96■■□□□ 1.11
IGKV4-1-201ENST00000390243 PCCAP05165 728 aaPredicted RBP21.95■■□□□ 1.1
IGKV4-1-201ENST00000390243 ALDH1B1P30837 517 aa21.95■■□□□ 1.1
IGKV4-1-201ENST00000390243 FKBP4Q02790 459 aaKnown RBP eCLIP21.95■■□□□ 1.1
IGKV4-1-201ENST00000390243 CELF1Q92879 486 aaKnown RBP21.95■■□□□ 1.1
IGKV4-1-201ENST00000390243 DNAAF4Q8WXU2 420 aa21.94■■□□□ 1.1
IGKV4-1-201ENST00000390243 CCDC85AQ96PX6 553 aaPredicted RBP21.94■■□□□ 1.1
IGKV4-1-201ENST00000390243 WDR90Q96KV7 1748 aa21.94■■□□□ 1.1
IGKV4-1-201ENST00000390243 CASP7P55210 303 aa21.93■■□□□ 1.1
IGKV4-1-201ENST00000390243 SF3B3Q15393 1217 aaKnown RBP21.93■■□□□ 1.1
IGKV4-1-201ENST00000390243 SEC31BQ9NQW1 1179 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms