RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SIL1Q9H173 461 aa15.08■□□□□ 0
SPTBN1-203ENST00000389980 FOXO4P98177 505 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 LMBR1LQ6UX01 489 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 NOP58Q9Y2X3 529 aaKnown RBP15.07■□□□□ 0
SPTBN1-203ENST00000389980 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 RAB11FIP3O75154 756 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 TRIM37O94972 964 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 GSPT1P15170 499 aaKnown RBP15.07■□□□□ 0
SPTBN1-203ENST00000389980 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
SPTBN1-203ENST00000389980 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
SPTBN1-203ENST00000389980 NLRP10Q86W26 655 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
SPTBN1-203ENST00000389980 CHMP3Q9Y3E7 222 aa15.07■□□□□ 0
SPTBN1-203ENST00000389980 COL15A1P39059 1388 aa15.06■□□□□ 0
SPTBN1-203ENST00000389980 LY75O60449 1722 aa15.06■□□□□ 0
SPTBN1-203ENST00000389980 CAMTA2O94983 1202 aa15.06■□□□□ 0
SPTBN1-203ENST00000389980 BMP2KLQ5H9B9 411 aa15.06■□□□□ 0
SPTBN1-203ENST00000389980 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
SPTBN1-203ENST00000389980 HSP90AB3PQ58FF7 597 aa15.05■□□□□ 0
SPTBN1-203ENST00000389980 FAM196AQ6ZSG2 479 aa15.05■□□□□ 0
SPTBN1-203ENST00000389980 NUTM1Q86Y26 1132 aa15.05■□□□□ 0
SPTBN1-203ENST00000389980 KIF1BPQ96EK5 621 aa15.05■□□□□ 0
SPTBN1-203ENST00000389980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.05■□□□□ 0
SPTBN1-203ENST00000389980 TAF1LQ8IZX4 1826 aa15.05■□□□□ -0
SPTBN1-203ENST00000389980 RFX5P48382 616 aaPredicted RBP15.05■□□□□ -0
SPTBN1-203ENST00000389980 TTC22Q5TAA0 569 aa15.05■□□□□ -0
SPTBN1-203ENST00000389980 FAM177BA6PVY3 158 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 ANP32AP39687 249 aaKnown RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 PDE1AP54750 535 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 SALL3Q9BXA9 1300 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 CNTNAP4Q9C0A0 1308 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 PTPN12Q05209 780 aaKnown RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -01e-12■■□□□ 13.2
SPTBN1-203ENST00000389980 HSP90AB4PQ58FF6 505 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 ZBTB38Q8NAP3 1195 aaPredicted RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 LRRC4BQ9NT99 713 aa15.04■□□□□ -0
SPTBN1-203ENST00000389980 RGS17Q9UGC6 210 aaPredicted RBP15.04■□□□□ -0
SPTBN1-203ENST00000389980 GNPATO15228 680 aa15.03■□□□□ -0
SPTBN1-203ENST00000389980 SASH1O94885 1247 aa15.03■□□□□ -0
SPTBN1-203ENST00000389980 MX1P20591 662 aa15.03■□□□□ -0
SPTBN1-203ENST00000389980 TRMT112Q9UI30 125 aaKnown RBP15.03■□□□□ -0
SPTBN1-203ENST00000389980 RXRBP28702 533 aa15.02■□□□□ -0
SPTBN1-203ENST00000389980 FBXO41Q8TF61 875 aa15.02■□□□□ -0
SPTBN1-203ENST00000389980 RC3H1Q5TC82 1133 aaKnown RBP15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 ZNF594Q96JF6 807 aaPredicted RBP15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 OSBPL3Q9H4L5 887 aa15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 NIP7Q9Y221 180 aaKnown RBP eCLIP15.01□□□□□ -0.01
SPTBN1-203ENST00000389980 BCORQ6W2J9 1755 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 RPS6KA4O75676 772 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 SDSP20132 328 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 POTEAQ6S8J7 498 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 ERC1Q8IUD2 1116 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
SPTBN1-203ENST00000389980 C4BP0C0L5 1744 aa15□□□□□ -0.01
SPTBN1-203ENST00000389980 IRS4O14654 1257 aaPredicted RBP15□□□□□ -0.01
SPTBN1-203ENST00000389980 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
SPTBN1-203ENST00000389980 MYH3P11055 1940 aa14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 PHF14O94880 888 aa14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 IPO9Q96P70 1041 aaKnown RBP14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 RTCBQ9Y3I0 505 aaKnown RBP14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
SPTBN1-203ENST00000389980 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 USPL1Q5W0Q7 1092 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 AACSQ86V21 672 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 EAF2Q96CJ1 260 aaPredicted RBP14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 HCLS1P14317 486 aaPredicted RBP14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 TFCP2Q12800 502 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 CCDC8Q9H0W5 538 aaPredicted RBP14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 TUBGCP6Q96RT7 1819 aa14.98□□□□□ -0.01
SPTBN1-203ENST00000389980 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 TTLL11Q8NHH1 800 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 UTP14AQ9BVJ6 771 aaKnown RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 PUS3Q9BZE2 481 aaKnown RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 ZNF652Q9Y2D9 606 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 MAP4K4O95819 1239 aaPredicted RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 CSF1RP07333 972 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 IFIT2P09913 472 aaKnown RBP14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 CCDC57Q2TAC2 916 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 AK7Q96M32 723 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 GREM2Q9H772 168 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
SPTBN1-203ENST00000389980 CDC45O75419 566 aa14.96□□□□□ -0.01
SPTBN1-203ENST00000389980 CTSWP56202 376 aa14.96□□□□□ -0.01
SPTBN1-203ENST00000389980 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms