RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 EVI5LQ96CN4 794 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 EDC3Q96F86 508 aaKnown RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 NUP88Q99567 741 aaPredicted RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 CCDC113Q9H0I3 377 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 GRIN2AQ12879 1464 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 IDEP14735 1019 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 OTUD7BQ6GQQ9 843 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 RBM25P49756 843 aaKnown RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 STX17P56962 302 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 FKBP15Q5T1M5 1219 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ANKRD44Q8N8A2 993 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ACBD3Q9H3P7 528 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ANO10Q9NW15 660 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 NOL7Q9UMY1 257 aaKnown RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 TIMM10P62072 90 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 BCCIPQ9P287 314 aaKnown RBP eCLIP5.8□□□□□ -1.48
LTN1-202ENST00000389194 NLRP5P59047 1200 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 STIM1Q13586 685 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 LRSAM1Q6UWE0 723 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 AOPEPQ8N6M6 819 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 PRAG1Q86YV5 1406 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 CDKL5O76039 1030 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SYCP1Q15431 976 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 DZIP1Q86YF9 867 aaKnown RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 KIF18AQ8NI77 898 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 RBSNQ9H1K0 784 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 NCOA5Q9HCD5 579 aaKnown RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 PTPRCP08575 1304 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 MACROD2A1Z1Q3 448 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 GADD45BO75293 160 aaPredicted RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.79□□□□□ -1.48
LTN1-202ENST00000389194 FAM107BQ9H098 131 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 STX8Q9UNK0 236 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 MSH6P52701 1360 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 FANCAO15360 1455 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 UBE2HP62256 183 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 ZSCAN25Q6NSZ9 544 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 ZNF594Q96JF6 807 aaPredicted RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SYCP2Q9BX26 1530 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 CASQ1P31415 396 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 TMCO3Q6UWJ1 677 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 MTERF4Q7Z6M4 381 aaKnown RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 EYA1Q99502 592 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 HYPKQ9NX55 129 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SETD1BQ9UPS6 1966 aaKnown RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 TTC21BQ7Z4L5 1316 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 METAP2P50579 478 aaKnown RBP eCLIP5.79□□□□□ -1.48
LTN1-202ENST00000389194 CCDC96Q2M329 555 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 KCNH5Q8NCM2 988 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SH2B1Q9NRF2 756 aaPredicted RBP5.79□□□□□ -1.48
LTN1-202ENST00000389194 ABCC11Q96J66 1382 aa5.79□□□□□ -1.48
LTN1-202ENST00000389194 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 IARSP41252 1262 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 FAM227BQ96M60 508 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 LGR6Q9HBX8 967 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 TRAPPC8Q9Y2L5 1435 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 MYO1BO43795 1136 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 TFCP2Q12800 502 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 TDRD12Q587J7 1177 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 BICC1Q9H694 974 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 A0A1W2PP64 1363 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 CBFA2T2O43439 604 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 GNG11P61952 73 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 NOLC1Q14978 699 aaKnown RBP eCLIP5.78□□□□□ -1.48
LTN1-202ENST00000389194 PPIP5K1Q6PFW1 1433 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 ANKRD18BA2A2Z9 1011 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 C6orf229H3BNL8 230 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 GRM8O00222 908 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 CWC25Q9NXE8 425 aaPredicted RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 A0A1B0GVL5 298 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 hCG_1642624A0A1W2PR95 340 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 DNAI1Q9UI46 699 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 TRIM35Q9UPQ4 493 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 ATP10BO94823 1461 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 ARID5AQ03989 594 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 KARSQ15046 597 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 CAVIN4Q5BKX8 364 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 CEP135Q66GS9 1140 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 USP26Q9BXU7 913 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 HMGXB3Q12766 1538 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 SKILP12757 684 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 SNW1Q13573 536 aaKnown RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 SLC9C2Q5TAH2 1124 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 TCERG1LQ5VWI1 586 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 CTCFLQ8NI51 663 aaPredicted RBP5.78□□□□□ -1.48
LTN1-202ENST00000389194 DACH1Q9UI36 760 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 AKAP2Q9Y2D5 859 aa5.78□□□□□ -1.48
LTN1-202ENST00000389194 PHACTR2O75167 634 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 ZPR1O75312 459 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 F13A1P00488 732 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 USP8P40818 1118 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 ATP8B2P98198 1209 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 RAB3GAP1Q15042 981 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms