RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 TCERG1LQ5VWI1 586 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CYB5RLQ6IPT4 315 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 C11orf87Q6NUJ2 197 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PCSK4Q6UW60 755 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 WFDC3Q8IUB2 231 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ITPKCQ96DU7 683 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MS4A4AQ96JQ5 239 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CFHR5Q9BXR6 569 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MFRPQ9BY79 579 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 WFDC1Q9HC57 220 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CD248Q9HCU0 757 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 COL7A1Q02388 2944 aa-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF469Q96JG9 3925 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PRSS47A8MTI9 375 aa-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TBC1D12O60347 775 aa-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZIC2O95409 532 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PYGBP11216 843 aa-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF37AP17032 561 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PAXIP1Q6ZW49 1069 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SMARCC1Q92922 1105 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 AGAP2Q99490 1192 aa-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TSEN34Q9BSV6 310 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1340P-201ENST00000384438 KMT2CQ8NEZ4 4911 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZBTB42B2RXF5 422 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SPINT1O43278 529 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RBMXL2O75526 392 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 KRTAP1-4P0C5Y4 121 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RNF43Q68DV7 783 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TTC9BQ8N6N2 239 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RBMXL3Q8N7X1 1067 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 FAM98AQ8NCA5 519 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 FLCNQ8NFG4 579 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TMC2Q8TDI7 906 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SPSB2Q99619 263 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 DBNDD2Q9BQY9 259 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PRDM6Q9NQX0 595 aa-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZBTB47Q9UFB7 747 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZFR2Q9UPR6 939 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TENM4Q6N022 2769 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RNF40O75150 1001 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZFPL1O95159 310 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RNASE1P07998 156 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ARAFP10398 606 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 HRCP23327 699 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CNR2P34972 360 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SCRN1Q12765 414 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NAALADL2Q58DX5 795 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 C20orf204Q6ZNR8 217 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TMPRSS12Q86WS5 348 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 KRT78Q8N1N4 520 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SYT8Q8NBV8 401 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SHKBP1Q8TBC3 707 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 BAHD1Q8TBE0 780 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RBM15Q96T37 977 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RC3H2Q9HBD1 1191 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MBNL3Q9NUK0 354 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 BSDC1Q9NW68 430 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 STOML1Q9UBI4 398 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 USP21Q9UK80 565 aa-0.72□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NEURL1BA8MQ27 555 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NR1I2O75469 434 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 BAG4O95429 457 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FOSL1P15407 271 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 COL10A1Q03692 680 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PLCL1Q15111 1095 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 KCNMB1Q16558 191 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FLAD1Q8NFF5 587 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 C8orf49Q96NF6 230 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CRIM1Q9NZV1 1036 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TSKSQ9UJT2 592 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ADAMTS6Q9UKP5 1117 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TSC22D4Q9Y3Q8 395 aa-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 COL3A1P02461 1466 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1340P-201ENST00000384438 RUSC2Q8N2Y8 1516 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 C17orf51A8MQB3 221 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 C3orf80F5H4A9 247 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SMAPO00193 183 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ACTN4O43707 911 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 GIGYF1O75420 1035 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ITGB3P05106 788 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SRFP11831 508 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SYCE2Q6PIF2 218 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NAA40Q86UY6 237 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PACS2Q86VP3 889 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FCHSD1Q86WN1 690 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 LRRN4CLQ8ND94 238 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 EHBP1Q8NDI1 1231 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 DVL3Q92997 716 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 INSM2Q96T92 566 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TRIM8Q9BZR9 551 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ZBTB4Q9P1Z0 1013 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PTGFRNQ9P2B2 879 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PCDHAC2Q9Y5I4 1007 aa-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 KMT2BQ9UMN6 2715 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FBN2P35556 2912 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 H7C1W4 665 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 DDNO94850 711 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ADRA1BP35368 520 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TAF6P49848 677 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms