RNA–Protein interactions for RNA: ENST00000381285.8

ITSN1-204, Transcript of intersectin 1, humanhuman

TSL 5 BASIC

Gene ITSN1, Length 6,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-204ENST00000381285 ACEP12821 1306 aa17.77■□□□□ 0.44
ITSN1-204ENST00000381285 TCHPQ9BT92 498 aa17.77■□□□□ 0.44
ITSN1-204ENST00000381285 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
ITSN1-204ENST00000381285 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.44
ITSN1-204ENST00000381285 KIF5BP33176 963 aa17.77■□□□□ 0.44
ITSN1-204ENST00000381285 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.44
ITSN1-204ENST00000381285 SIRT1Q96EB6 747 aa17.77■□□□□ 0.44
ITSN1-204ENST00000381285 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
ITSN1-204ENST00000381285 SBNO2Q9Y2G9 1366 aa17.77■□□□□ 0.43
ITSN1-204ENST00000381285 IFT140Q96RY7 1462 aa17.77■□□□□ 0.43
ITSN1-204ENST00000381285 GJC1P36383 396 aa17.77■□□□□ 0.43
ITSN1-204ENST00000381285 CCDC174Q6PII3 467 aa17.77■□□□□ 0.43
ITSN1-204ENST00000381285 GSTO1P78417 241 aa17.76■□□□□ 0.43
ITSN1-204ENST00000381285 OTUD6BQ8N6M0 293 aa17.76■□□□□ 0.43
ITSN1-204ENST00000381285 ERLIN1O75477 346 aa17.76■□□□□ 0.43
ITSN1-204ENST00000381285 NOP2P46087 812 aaKnown RBP17.76■□□□□ 0.43
ITSN1-204ENST00000381285 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
ITSN1-204ENST00000381285 EP400NLQ6ZTU2 488 aa17.76■□□□□ 0.43
ITSN1-204ENST00000381285 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
ITSN1-204ENST00000381285 TTF1Q15361 905 aaPredicted RBP17.76■□□□□ 0.43
ITSN1-204ENST00000381285 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
ITSN1-204ENST00000381285 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
ITSN1-204ENST00000381285 IFFO1Q0D2I5 559 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
ITSN1-204ENST00000381285 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
ITSN1-204ENST00000381285 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
ITSN1-204ENST00000381285 CETN1Q12798 172 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
ITSN1-204ENST00000381285 GOLGA6L7A0A1B0GV03 622 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 SSX2IPQ9Y2D8 614 aa17.75■□□□□ 0.43
ITSN1-204ENST00000381285 CCDC12Q8WUD4 166 aaPredicted RBP17.74■□□□□ 0.43
ITSN1-204ENST00000381285 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
ITSN1-204ENST00000381285 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 SMARCC2Q8TAQ2 1214 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 PHAXQ9H814 394 aaKnown RBP17.74■□□□□ 0.43
ITSN1-204ENST00000381285 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 RFX1P22670 979 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
ITSN1-204ENST00000381285 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 MIGA1Q8NAN2 632 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
ITSN1-204ENST00000381285 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
ITSN1-204ENST00000381285 LMTK3Q96Q04 1460 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 UBA7P41226 1012 aa17.73■□□□□ 0.43
ITSN1-204ENST00000381285 ADGRL1O94910 1474 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 PROCA1Q8NCQ7 364 aaPredicted RBP17.72■□□□□ 0.43
ITSN1-204ENST00000381285 GNPATO15228 680 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 FGFR1OPO95684 399 aaKnown RBP17.72■□□□□ 0.43
ITSN1-204ENST00000381285 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
ITSN1-204ENST00000381285 EAPPQ56P03 285 aaPredicted RBP17.72■□□□□ 0.43
ITSN1-204ENST00000381285 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
ITSN1-204ENST00000381285 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
ITSN1-204ENST00000381285 CASQ1P31415 396 aa17.71■□□□□ 0.43
ITSN1-204ENST00000381285 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
ITSN1-204ENST00000381285 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
ITSN1-204ENST00000381285 ERICH4A6NGS2 130 aa17.71■□□□□ 0.43
ITSN1-204ENST00000381285 AFMP43652 599 aa17.71■□□□□ 0.43
ITSN1-204ENST00000381285 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.43
ITSN1-204ENST00000381285 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
ITSN1-204ENST00000381285 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
ITSN1-204ENST00000381285 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.43
ITSN1-204ENST00000381285 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
ITSN1-204ENST00000381285 STX6O43752 255 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 EIF3JO75822 258 aaKnown RBP17.7■□□□□ 0.42
ITSN1-204ENST00000381285 NOD1Q9Y239 953 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 DAPK1P53355 1430 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 WTAPQ15007 396 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
ITSN1-204ENST00000381285 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
ITSN1-204ENST00000381285 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
ITSN1-204ENST00000381285 AMPD3Q01432 767 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 GJB2P29033 226 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 NCOA7Q8NI08 942 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 HLTFQ14527 1009 aaKnown RBP eCLIP17.69■□□□□ 0.42
ITSN1-204ENST00000381285 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 STAMBPO95630 424 aa17.69■□□□□ 0.42
ITSN1-204ENST00000381285 KIF5CO60282 957 aa17.68■□□□□ 0.42
ITSN1-204ENST00000381285 NAPAP54920 295 aa17.68■□□□□ 0.42
ITSN1-204ENST00000381285 C20orf194Q5TEA3 1177 aa17.68■□□□□ 0.42
ITSN1-204ENST00000381285 URI1O94763 535 aaPredicted RBP17.68■□□□□ 0.42
ITSN1-204ENST00000381285 HARSP12081 509 aaKnown RBP17.68■□□□□ 0.42
ITSN1-204ENST00000381285 SFPQP23246 707 aaKnown RBP eCLIP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms