RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 ME1P48163 572 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-202ENST00000381160 ABCC3O15438 1527 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 ARHGAP29Q52LW3 1261 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 AOPEPQ8N6M6 819 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 UBXN4Q92575 508 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 SIL1Q9H173 461 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 SYCP1Q15431 976 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 UHRF1BP1LA0JNW5 1464 aa13.11□□□□□ -0.31
NPC1L1-202ENST00000381160 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 PPRC1Q5VV67 1664 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 C11orf57Q6ZUT1 292 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 JAK2O60674 1132 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 BRF1Q92994 677 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 PA2G4Q9UQ80 394 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 STX1AQ16623 288 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
NPC1L1-202ENST00000381160 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 BIN1O00499 593 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 NEMFO60524 1076 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 DNAI1Q9UI46 699 aa13.09□□□□□ -0.31
NPC1L1-202ENST00000381160 CD163L1Q9NR16 1453 aa13.08□□□□□ -0.31
NPC1L1-202ENST00000381160 CFAP45Q9UL16 551 aa13.08□□□□□ -0.31
NPC1L1-202ENST00000381160 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 ZSWIM6Q9HCJ5 1215 aa13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.32
NPC1L1-202ENST00000381160 TPM4P67936 248 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 HNRNPH2P55795 449 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 GPS2Q13227 327 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 AOX1Q06278 1338 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 ZC3H13Q5T200 1668 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-202ENST00000381160 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
NPC1L1-202ENST00000381160 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
NPC1L1-202ENST00000381160 KIF2AO00139 706 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-202ENST00000381160 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
NPC1L1-202ENST00000381160 SLC27A2O14975 620 aa13.06□□□□□ -0.32
NPC1L1-202ENST00000381160 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 CCT2P78371 535 aaKnown RBP13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 IFNKQ9P0W0 207 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 ELP1O95163 1332 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 CLCN6P51797 869 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
NPC1L1-202ENST00000381160 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 GSDMDP57764 484 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 COL9A3Q14050 684 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 SEC31AO94979 1220 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 CAVIN2O95810 425 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
NPC1L1-202ENST00000381160 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms