RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 TXLNAP40222 546 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 HAND2P61296 217 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
GABPB1-203ENST00000380877 TRIM5Q9C035 493 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-203ENST00000380877 ANKRD18AQ8IVF6 992 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 OTUD7AQ8TE49 926 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-203ENST00000380877 WASF1Q92558 559 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 E9PCH4 1651 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 C6orf229H3BNL8 230 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 SEC24BO95487 1268 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 NBPF7P0C2Y1 421 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 ANAPC15P60006 121 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 CCDC43Q96MW1 224 aaKnown RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 NLRP3Q96P20 1036 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 RNF41Q9H4P4 317 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 RBM8AQ9Y5S9 174 aaKnown RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 LMTK2Q8IWU2 1503 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 ZFYP08048 801 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 POLR3DP05423 398 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
GABPB1-203ENST00000380877 ADGRB3O60242 1522 aa14.4□□□□□ -0.1
GABPB1-203ENST00000380877 ABCC4O15439 1325 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 RANBP6O60518 1105 aaKnown RBP14.39□□□□□ -0.11
GABPB1-203ENST00000380877 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-203ENST00000380877 PHKG2P15735 406 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 MKNK2Q9HBH9 465 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 TFCP2Q12800 502 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 SOGA3Q5TF21 947 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 ZNF287Q9HBT7 754 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 PNMA6EA0A0J9YXQ4 647 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
GABPB1-203ENST00000380877 IQCA1Q86XH1 822 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 NOL7Q9UMY1 257 aaKnown RBP14.39□□□□□ -0.11
GABPB1-203ENST00000380877 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 IFIT3O14879 490 aaKnown RBP14.39□□□□□ -0.11
GABPB1-203ENST00000380877 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 FAM89AQ96GI7 184 aa14.39□□□□□ -0.11
GABPB1-203ENST00000380877 GOLGA8BA8MQT2 603 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
GABPB1-203ENST00000380877 GRPEL1Q9HAV7 217 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 MADDQ8WXG6 1647 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 DNAJC10Q8IXB1 793 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 GLI2P10070 1586 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
GABPB1-203ENST00000380877 MCMDC2Q4G0Z9 681 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 C8orf76Q96K31 380 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 ARID3AQ99856 593 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-203ENST00000380877 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 CHMLP26374 656 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 ZNF592Q92610 1267 aa14.38□□□□□ -0.11
GABPB1-203ENST00000380877 IQSEC3Q9UPP2 1182 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-203ENST00000380877 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
GABPB1-203ENST00000380877 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
GABPB1-203ENST00000380877 PAG1Q9NWQ8 432 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 CCDC39Q9UFE4 941 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 CEP152O94986 1710 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 GUCY1B3Q02153 619 aa14.37□□□□□ -0.11
GABPB1-203ENST00000380877 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
GABPB1-203ENST00000380877 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
GABPB1-203ENST00000380877 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 INO80Q9ULG1 1556 aaPredicted RBP14.36□□□□□ -0.11
GABPB1-203ENST00000380877 ERVV-2B6SEH9 535 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 GCKRQ14397 625 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 TMOD2Q9NZR1 351 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 BRPF3Q9ULD4 1205 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 RTL1A6NKG5 1358 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 CDK12Q9NYV4 1490 aaPredicted RBP14.36□□□□□ -0.11
GABPB1-203ENST00000380877 GJB2P29033 226 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 SNX21Q969T3 373 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 CDK5RAP3Q96JB5 506 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 STX6O43752 255 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 FAM43AQ8N2R8 423 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
GABPB1-203ENST00000380877 BRF1Q92994 677 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
GABPB1-203ENST00000380877 LDHCP07864 332 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 TPTE2Q6XPS3 522 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 KIF24Q5T7B8 1368 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 ST5P78524 1137 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 CCDC173Q0VFZ6 552 aa14.35□□□□□ -0.11
GABPB1-203ENST00000380877 EYA2O00167 538 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms