RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 INTS3Q68E01 1043 aaKnown RBP23.8■■□□□ 1.4
SMN2-202ENST00000380742 FTSJ3Q8IY81 847 aaKnown RBP23.8■■□□□ 1.4
SMN2-202ENST00000380742 TMEM57Q8N5G2 664 aa23.8■■□□□ 1.4
SMN2-202ENST00000380742 CCDC191Q8NCU4 936 aa23.8■■□□□ 1.4
SMN2-202ENST00000380742 ALDH1L1O75891 902 aa23.79■■□□□ 1.4
SMN2-202ENST00000380742 CWC25Q9NXE8 425 aaPredicted RBP23.79■■□□□ 1.4
SMN2-202ENST00000380742 SERPINB2P05120 415 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 MS4A1P11836 297 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 GCKRQ14397 625 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 SGIP1Q9BQI5 828 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 NTSR2O95665 410 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 PDE3AQ14432 1141 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 PARP3Q9Y6F1 533 aa23.78■■□□□ 1.4
SMN2-202ENST00000380742 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
SMN2-202ENST00000380742 PTGER2P43116 358 aa23.77■■□□□ 1.4
SMN2-202ENST00000380742 PPP1R42Q7Z4L9 355 aa23.77■■□□□ 1.4
SMN2-202ENST00000380742 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
SMN2-202ENST00000380742 UTP14AQ9BVJ6 771 aaKnown RBP23.77■■□□□ 1.4
SMN2-202ENST00000380742 IBTKQ9P2D0 1353 aaPredicted RBP23.77■■□□□ 1.4
SMN2-202ENST00000380742 TRMT112Q9UI30 125 aaKnown RBP23.76■■□□□ 1.39
SMN2-202ENST00000380742 ANKRD31Q8N7Z5 1873 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 LAMB2P55268 1798 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 NUTM1Q86Y26 1132 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 SYNE4Q8N205 404 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 JARID2Q92833 1246 aaPredicted RBP23.75■■□□□ 1.39
SMN2-202ENST00000380742 NYXQ9GZU5 481 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 SPON1Q9HCB6 807 aa23.75■■□□□ 1.39
SMN2-202ENST00000380742 POLD1P28340 1107 aa23.74■■□□□ 1.39
SMN2-202ENST00000380742 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
SMN2-202ENST00000380742 PRR5LQ6MZQ0 368 aa23.74■■□□□ 1.39
SMN2-202ENST00000380742 TPTE2Q6XPS3 522 aa23.74■■□□□ 1.39
SMN2-202ENST00000380742 FAM89AQ96GI7 184 aa23.74■■□□□ 1.39
SMN2-202ENST00000380742 COG6Q9Y2V7 657 aa23.74■■□□□ 1.39
SMN2-202ENST00000380742 MYH3P11055 1940 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 H7C1W4 665 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 PCCAP05165 728 aaPredicted RBP23.73■■□□□ 1.39
SMN2-202ENST00000380742 ERFEQ4G0M1 354 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 ITPRIPQ8IWB1 547 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 CCDC24Q8N4L8 307 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 ZBTB38Q8NAP3 1195 aaPredicted RBP23.73■■□□□ 1.39
SMN2-202ENST00000380742 USP44Q9H0E7 712 aa23.73■■□□□ 1.39
SMN2-202ENST00000380742 KIF13BQ9NQT8 1826 aa23.72■■□□□ 1.39
SMN2-202ENST00000380742 GRM8O00222 908 aa23.72■■□□□ 1.39
SMN2-202ENST00000380742 CASP7P55210 303 aa23.72■■□□□ 1.39
SMN2-202ENST00000380742 CNBD1Q8NA66 436 aa23.72■■□□□ 1.39
SMN2-202ENST00000380742 C9orf78Q9NZ63 289 aaPredicted RBP23.72■■□□□ 1.39
SMN2-202ENST00000380742 SH3TC1Q8TE82 1336 aa23.72■■□□□ 1.39
SMN2-202ENST00000380742 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
SMN2-202ENST00000380742 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
SMN2-202ENST00000380742 NBPF7P0C2Y1 421 aaPredicted RBP23.71■■□□□ 1.39
SMN2-202ENST00000380742 MVPQ14764 893 aaKnown RBP23.71■■□□□ 1.39
SMN2-202ENST00000380742 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
SMN2-202ENST00000380742 UTYO14607 1347 aa23.71■■□□□ 1.39
SMN2-202ENST00000380742 GTF2E1P29083 439 aaPredicted RBP23.7■■□□□ 1.38
SMN2-202ENST00000380742 MEIS3Q99687 375 aa23.7■■□□□ 1.38
SMN2-202ENST00000380742 NPHP1O15259 732 aa23.69■■□□□ 1.38
SMN2-202ENST00000380742 CDHR2Q9BYE9 1310 aa23.69■■□□□ 1.38
SMN2-202ENST00000380742 ZBTB7BO15156 539 aaPredicted RBP23.68■■□□□ 1.38
SMN2-202ENST00000380742 SLC10A5Q5PT55 438 aa23.68■■□□□ 1.38
SMN2-202ENST00000380742 IRS4O14654 1257 aaPredicted RBP23.67■■□□□ 1.38
SMN2-202ENST00000380742 ST5P78524 1137 aa23.67■■□□□ 1.38
SMN2-202ENST00000380742 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
SMN2-202ENST00000380742 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
SMN2-202ENST00000380742 CRBNQ96SW2 442 aa23.66■■□□□ 1.38
SMN2-202ENST00000380742 DDX19BQ9UMR2 479 aa23.66■■□□□ 1.38
SMN2-202ENST00000380742 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
SMN2-202ENST00000380742 RIC1Q4ADV7 1423 aa23.65■■□□□ 1.38
SMN2-202ENST00000380742 COL11A2P13942 1736 aaPredicted RBP23.65■■□□□ 1.38
SMN2-202ENST00000380742 KIAA1551Q9HCM1 1747 aa23.65■■□□□ 1.38
SMN2-202ENST00000380742 LRP5O75197 1615 aa23.65■■□□□ 1.38
SMN2-202ENST00000380742 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
SMN2-202ENST00000380742 SUCLG2Q96I99 432 aa23.65■■□□□ 1.38
SMN2-202ENST00000380742 GNAI3P08754 354 aa23.64■■□□□ 1.37
SMN2-202ENST00000380742 UBTFL1P0CB47 393 aaPredicted RBP23.64■■□□□ 1.37
SMN2-202ENST00000380742 C3orf67Q6ZVT6 689 aa23.64■■□□□ 1.37
SMN2-202ENST00000380742 BRIP1Q9BX63 1249 aa23.64■■□□□ 1.37
SMN2-202ENST00000380742 PDE8AO60658 829 aa23.63■■□□□ 1.37
SMN2-202ENST00000380742 EPHA10Q5JZY3 1008 aa23.63■■□□□ 1.37
SMN2-202ENST00000380742 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
SMN2-202ENST00000380742 TAF1P21675 1872 aa23.63■■□□□ 1.37
SMN2-202ENST00000380742 FOXO4P98177 505 aa23.62■■□□□ 1.37
SMN2-202ENST00000380742 DLEC1Q9Y238 1755 aa23.61■■□□□ 1.37
SMN2-202ENST00000380742 NLRP3Q96P20 1036 aa23.61■■□□□ 1.37
SMN2-202ENST00000380742 ZBTB40Q9NUA8 1239 aa23.61■■□□□ 1.37
SMN2-202ENST00000380742 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
SMN2-202ENST00000380742 KLRG2A4D1S0 409 aaPredicted RBP23.6■■□□□ 1.37
SMN2-202ENST00000380742 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
SMN2-202ENST00000380742 PDE6BP35913 854 aa23.59■■□□□ 1.37
SMN2-202ENST00000380742 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
SMN2-202ENST00000380742 BICC1Q9H694 974 aaKnown RBP23.59■■□□□ 1.37
SMN2-202ENST00000380742 C1orf115Q9H7X2 142 aa23.59■■□□□ 1.37
SMN2-202ENST00000380742 CACNA1SQ13698 1873 aa23.59■■□□□ 1.37
SMN2-202ENST00000380742 GNAI2P04899 355 aa23.58■■□□□ 1.37
SMN2-202ENST00000380742 CTSWP56202 376 aa23.58■■□□□ 1.37
SMN2-202ENST00000380742 ANKRD44Q8N8A2 993 aa23.58■■□□□ 1.37
SMN2-202ENST00000380742 TTLL11Q8NHH1 800 aa23.58■■□□□ 1.37
SMN2-202ENST00000380742 PPP1R1BQ9UD71 204 aaPredicted RBP23.58■■□□□ 1.37
SMN2-202ENST00000380742 CD2APQ9Y5K6 639 aa23.58■■□□□ 1.37
SMN2-202ENST00000380742 CSF1RP07333 972 aa23.57■■□□□ 1.36
SMN2-202ENST00000380742 SF3B3Q15393 1217 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms