RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
UBL3-201ENST00000380680 XRCC6P12956 609 aaKnown RBP eCLIP20.9■□□□□ 0.94
UBL3-201ENST00000380680 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
UBL3-201ENST00000380680 ZNF853P0CG23 659 aa20.89■□□□□ 0.94
UBL3-201ENST00000380680 ZSCAN30Q86W11 494 aa20.89■□□□□ 0.93
UBL3-201ENST00000380680 CCDC82Q8N4S0 544 aa20.89■□□□□ 0.93
UBL3-201ENST00000380680 PANK2Q9BZ23 570 aa20.89■□□□□ 0.93
UBL3-201ENST00000380680 GSPT1P15170 499 aaKnown RBP20.89■□□□□ 0.93
UBL3-201ENST00000380680 IL15P40933 162 aaPredicted RBP20.89■□□□□ 0.93
UBL3-201ENST00000380680 HMGN5P82970 282 aaKnown RBP20.89■□□□□ 0.93
UBL3-201ENST00000380680 USP6P35125 1406 aa20.88■□□□□ 0.93
UBL3-201ENST00000380680 C8orf76Q96K31 380 aa20.88■□□□□ 0.93
UBL3-201ENST00000380680 PCMTD1Q96MG8 357 aaPredicted RBP20.88■□□□□ 0.93
UBL3-201ENST00000380680 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
UBL3-201ENST00000380680 ZNF496Q96IT1 587 aaPredicted RBP20.88■□□□□ 0.93
UBL3-201ENST00000380680 SLC5A1P13866 664 aa20.88■□□□□ 0.93
UBL3-201ENST00000380680 AK2P54819 239 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 TFCP2Q12800 502 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 PDILTQ8N807 584 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 CPA1P15085 419 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
UBL3-201ENST00000380680 TPM2P07951 284 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 NGLY1Q96IV0 654 aa20.87■□□□□ 0.93
UBL3-201ENST00000380680 ZSCAN23Q3MJ62 389 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 GOLGA8BA8MQT2 603 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 BRPF1P55201 1214 aaPredicted RBP20.86■□□□□ 0.93
UBL3-201ENST00000380680 MCMDC2Q4G0Z9 681 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 IGSF1Q8N6C5 1336 aa20.86■□□□□ 0.93
UBL3-201ENST00000380680 SAMD1Q6SPF0 538 aaPredicted RBP20.85■□□□□ 0.93
UBL3-201ENST00000380680 SLC52A2Q9HAB3 445 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 ATP2B3Q16720 1220 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 CAVIN4Q5BKX8 364 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 USP25Q9UHP3 1055 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 KIF24Q5T7B8 1368 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 CEP57L1Q8IYX8 460 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 PIBF1Q8WXW3 757 aa20.85■□□□□ 0.93
UBL3-201ENST00000380680 ABCA6Q8N139 1617 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 GIGYF1O75420 1035 aaPredicted RBP20.84■□□□□ 0.93
UBL3-201ENST00000380680 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 METTL22Q9BUU2 404 aaPredicted RBP20.84■□□□□ 0.93
UBL3-201ENST00000380680 ZPR1O75312 459 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 GLI2P10070 1586 aa20.84■□□□□ 0.93
UBL3-201ENST00000380680 IPO7O95373 1038 aaKnown RBP20.83■□□□□ 0.93
UBL3-201ENST00000380680 UBE2HP62256 183 aa20.83■□□□□ 0.93
UBL3-201ENST00000380680 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
UBL3-201ENST00000380680 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
UBL3-201ENST00000380680 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
UBL3-201ENST00000380680 TIMM10P62072 90 aa20.83■□□□□ 0.92
UBL3-201ENST00000380680 ADGRB3O60242 1522 aa20.82■□□□□ 0.92
UBL3-201ENST00000380680 PAG1Q9NWQ8 432 aa20.82■□□□□ 0.92
UBL3-201ENST00000380680 A1BGP04217 495 aa20.82■□□□□ 0.92
UBL3-201ENST00000380680 USP48Q86UV5 1035 aa20.82■□□□□ 0.92
UBL3-201ENST00000380680 IFIT3O14879 490 aaKnown RBP20.82■□□□□ 0.92
UBL3-201ENST00000380680 SERPINC1P01008 464 aa20.82■□□□□ 0.92
UBL3-201ENST00000380680 SSH3Q8TE77 659 aa20.81■□□□□ 0.92
UBL3-201ENST00000380680 SIRT2Q8IXJ6 389 aa20.81■□□□□ 0.92
UBL3-201ENST00000380680 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
UBL3-201ENST00000380680 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
UBL3-201ENST00000380680 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
UBL3-201ENST00000380680 SGSM2O43147 1006 aa20.81■□□□□ 0.92
UBL3-201ENST00000380680 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
UBL3-201ENST00000380680 INTS4Q96HW7 963 aaKnown RBP20.81■□□□□ 0.92
UBL3-201ENST00000380680 CCDC171Q6TFL3 1326 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 CEP152O94986 1710 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 Q6ZUG5 572 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 ATP2B2Q01814 1243 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 DNM1Q05193 864 aaKnown RBP20.8■□□□□ 0.92
UBL3-201ENST00000380680 GCKRQ14397 625 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 MICU3Q86XE3 530 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 WASF1Q92558 559 aa20.8■□□□□ 0.92
UBL3-201ENST00000380680 HCLS1P14317 486 aaPredicted RBP20.79■□□□□ 0.92
UBL3-201ENST00000380680 CCDC144CPQ8IYA2 1237 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 RANBP6O60518 1105 aaKnown RBP20.79■□□□□ 0.92
UBL3-201ENST00000380680 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 SLC12A7Q9Y666 1083 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
UBL3-201ENST00000380680 ZFYP08048 801 aaPredicted RBP20.79■□□□□ 0.92
UBL3-201ENST00000380680 TXLNAP40222 546 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 NCOA7Q8NI08 942 aa20.79■□□□□ 0.92
UBL3-201ENST00000380680 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
UBL3-201ENST00000380680 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
UBL3-201ENST00000380680 IQSEC3Q9UPP2 1182 aaPredicted RBP20.78■□□□□ 0.92
UBL3-201ENST00000380680 POLR3DP05423 398 aaPredicted RBP20.78■□□□□ 0.92
UBL3-201ENST00000380680 F13A1P00488 732 aa20.78■□□□□ 0.92
UBL3-201ENST00000380680 HELBQ8NG08 1087 aaPredicted RBP20.78■□□□□ 0.92
UBL3-201ENST00000380680 FAM227BQ96M60 508 aa20.78■□□□□ 0.92
UBL3-201ENST00000380680 CDC5LQ99459 802 aaKnown RBP20.78■□□□□ 0.92
UBL3-201ENST00000380680 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
UBL3-201ENST00000380680 LRSAM1Q6UWE0 723 aa20.78■□□□□ 0.92
UBL3-201ENST00000380680 ATP6V1AP38606 617 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms