RNA–Protein interactions for RNA: ENST00000379892.4

DCLK1-203, Transcript of doublecortin like kinase 1, humanhuman

TSL 5 BASIC

Gene DCLK1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-203ENST00000379892 CCDC171Q6TFL3 1326 aa21.82■■□□□ 1.08
DCLK1-203ENST00000379892 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
DCLK1-203ENST00000379892 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
DCLK1-203ENST00000379892 JAKMIP1Q96N16 626 aaKnown RBP21.82■■□□□ 1.08
DCLK1-203ENST00000379892 LARGE1O95461 756 aa21.82■■□□□ 1.08
DCLK1-203ENST00000379892 NMIQ13287 307 aaPredicted RBP21.82■■□□□ 1.08
DCLK1-203ENST00000379892 NECTIN1Q15223 517 aa21.82■■□□□ 1.08
DCLK1-203ENST00000379892 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
DCLK1-203ENST00000379892 SYCE3A1L190 88 aa21.81■■□□□ 1.08
DCLK1-203ENST00000379892 LRSAM1Q6UWE0 723 aa21.81■■□□□ 1.08
DCLK1-203ENST00000379892 BOLA2Q9H3K6 86 aa21.81■■□□□ 1.08
DCLK1-203ENST00000379892 GDPD2Q9HCC8 539 aa21.81■■□□□ 1.08
DCLK1-203ENST00000379892 ANP32BQ92688 251 aaKnown RBP21.8■■□□□ 1.08
DCLK1-203ENST00000379892 FMNL2Q96PY5 1086 aa21.8■■□□□ 1.08
DCLK1-203ENST00000379892 TM6SF1Q9BZW5 370 aa21.8■■□□□ 1.08
DCLK1-203ENST00000379892 ZSWIM6Q9HCJ5 1215 aa21.8■■□□□ 1.08
DCLK1-203ENST00000379892 HIP1O00291 1037 aa21.8■■□□□ 1.08
DCLK1-203ENST00000379892 PDRG1Q9NUG6 133 aa21.8■■□□□ 1.08
DCLK1-203ENST00000379892 RBM8AQ9Y5S9 174 aaKnown RBP21.8■■□□□ 1.08
DCLK1-203ENST00000379892 VPS53Q5VIR6 699 aa21.79■■□□□ 1.08
DCLK1-203ENST00000379892 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.79■■□□□ 1.08
DCLK1-203ENST00000379892 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
DCLK1-203ENST00000379892 PLEKHG2Q9H7P9 1386 aa21.79■■□□□ 1.08
DCLK1-203ENST00000379892 GADD45BO75293 160 aaPredicted RBP21.79■■□□□ 1.08
DCLK1-203ENST00000379892 USP48Q86UV5 1035 aa21.79■■□□□ 1.08
DCLK1-203ENST00000379892 SNRKQ9NRH2 765 aa21.79■■□□□ 1.08
DCLK1-203ENST00000379892 A0A0D9SFI3 127 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 RFX5P48382 616 aaPredicted RBP21.78■■□□□ 1.08
DCLK1-203ENST00000379892 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 CADPS2Q86UW7 1296 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 MAP4K1Q92918 833 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 CYP46A1Q9Y6A2 500 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 SPATA31A3Q5VYP0 1347 aa21.78■■□□□ 1.08
DCLK1-203ENST00000379892 ZSCAN22P10073 491 aaPredicted RBP21.77■■□□□ 1.08
DCLK1-203ENST00000379892 SYT1P21579 422 aa21.77■■□□□ 1.08
DCLK1-203ENST00000379892 CABP4P57796 275 aa21.77■■□□□ 1.08
DCLK1-203ENST00000379892 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
DCLK1-203ENST00000379892 FSD1Q9BTV5 496 aa21.77■■□□□ 1.08
DCLK1-203ENST00000379892 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
DCLK1-203ENST00000379892 SMC3Q9UQE7 1217 aa21.77■■□□□ 1.08
DCLK1-203ENST00000379892 STX6O43752 255 aa21.76■■□□□ 1.07
DCLK1-203ENST00000379892 UBE3BQ7Z3V4 1068 aa21.76■■□□□ 1.07
DCLK1-203ENST00000379892 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
DCLK1-203ENST00000379892 ATP5J2-PTCD1G3V325 749 aa21.76■■□□□ 1.07
DCLK1-203ENST00000379892 PTCD1O75127 700 aaKnown RBP21.76■■□□□ 1.07
DCLK1-203ENST00000379892 ZKSCAN1P17029 563 aaPredicted RBP21.76■■□□□ 1.07
DCLK1-203ENST00000379892 PTPN12Q05209 780 aaKnown RBP21.76■■□□□ 1.07
DCLK1-203ENST00000379892 GLI3P10071 1580 aa21.76■■□□□ 1.07
DCLK1-203ENST00000379892 CPDO75976 1380 aa21.75■■□□□ 1.07
DCLK1-203ENST00000379892 KCNJ4P48050 445 aa21.75■■□□□ 1.07
DCLK1-203ENST00000379892 RABL6Q3YEC7 729 aaPredicted RBP21.75■■□□□ 1.07
DCLK1-203ENST00000379892 SLC27A2O14975 620 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 ST3GAL1Q11201 340 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 TMEM87AQ8NBN3 555 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 ARFGEF2Q9Y6D5 1785 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 AFDNP55196 1824 aaKnown RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 DTNBO60941 627 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 COL9A3Q14050 684 aaPredicted RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 EDC3Q96F86 508 aaKnown RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 SH2B1Q9NRF2 756 aaPredicted RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 DBNLQ9UJU6 430 aaKnown RBP21.74■■□□□ 1.07
DCLK1-203ENST00000379892 CNPY2Q9Y2B0 182 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 COL15A1P39059 1388 aa21.74■■□□□ 1.07
DCLK1-203ENST00000379892 TFCP2Q12800 502 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 A0A087WZG4 1122 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 F13A1P00488 732 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 GJB2P29033 226 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 CASP7P55210 303 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 TCHHQ07283 1943 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 ME3Q16798 604 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 TNNI3KQ59H18 835 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 FPGT-TNNI3KV9GXZ4 949 aa21.73■■□□□ 1.07
DCLK1-203ENST00000379892 ZNF589Q86UQ0 364 aaPredicted RBP21.72■■□□□ 1.07
DCLK1-203ENST00000379892 PLBD2Q8NHP8 589 aa21.72■■□□□ 1.07
DCLK1-203ENST00000379892 SYAP1Q96A49 352 aaPredicted RBP21.72■■□□□ 1.07
DCLK1-203ENST00000379892 PDLIM2Q96JY6 352 aa21.72■■□□□ 1.07
DCLK1-203ENST00000379892 ATP5JP18859 108 aa21.71■■□□□ 1.07
DCLK1-203ENST00000379892 TPCN1Q9ULQ1 816 aa21.71■■□□□ 1.07
DCLK1-203ENST00000379892 TAF6LQ9Y6J9 622 aa21.71■■□□□ 1.07
DCLK1-203ENST00000379892 JCADQ9P266 1359 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 NBPF26B4DH59 902 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 NBPF14Q5TI25 921 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 NBPF10Q6P3W6 841 aaKnown RBP21.7■■□□□ 1.06
DCLK1-203ENST00000379892 NBPF15Q8N660 670 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 NECAB1Q8N987 351 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 LAMB4A4D0S4 1761 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 PARP4Q9UKK3 1724 aaKnown RBP21.7■■□□□ 1.06
DCLK1-203ENST00000379892 MTMR6Q9Y217 621 aa21.7■■□□□ 1.06
DCLK1-203ENST00000379892 PSMA5P28066 241 aa21.69■■□□□ 1.06
DCLK1-203ENST00000379892 TSPY26PQ9H489 355 aa21.69■■□□□ 1.06
DCLK1-203ENST00000379892 RNF20Q5VTR2 975 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 RNF214Q8ND24 703 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 NDUFB9Q9Y6M9 179 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 TAF5LO75529 589 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 DBNDD2Q9BQY9 259 aa21.68■■□□□ 1.06
DCLK1-203ENST00000379892 LMBR1LQ6UX01 489 aa21.67■■□□□ 1.06
DCLK1-203ENST00000379892 BLOC1S2Q6QNY1 142 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms