RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
SNX2-201ENST00000379516 RABEP1Q15276 862 aa18.36■□□□□ 0.53
SNX2-201ENST00000379516 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
SNX2-201ENST00000379516 MARCH10Q8NA82 808 aaPredicted RBP18.35■□□□□ 0.53
SNX2-201ENST00000379516 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
SNX2-201ENST00000379516 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
SNX2-201ENST00000379516 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
SNX2-201ENST00000379516 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
SNX2-201ENST00000379516 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
SNX2-201ENST00000379516 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
SNX2-201ENST00000379516 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.52
SNX2-201ENST00000379516 K7ELQ4 463 aaPredicted RBP18.32■□□□□ 0.52
SNX2-201ENST00000379516 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 KAT6BQ8WYB5 2073 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 MYT1Q01538 1121 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 TFCP2Q12800 502 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
SNX2-201ENST00000379516 MCCP23508 829 aa18.31■□□□□ 0.52
SNX2-201ENST00000379516 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
SNX2-201ENST00000379516 IL25Q9H293 177 aa18.31■□□□□ 0.52
SNX2-201ENST00000379516 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
SNX2-201ENST00000379516 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SNX2-201ENST00000379516 HLFQ16534 295 aa18.3■□□□□ 0.52
SNX2-201ENST00000379516 JCADQ9P266 1359 aa18.3■□□□□ 0.52
SNX2-201ENST00000379516 TJP1Q07157 1748 aa18.3■□□□□ 0.52
SNX2-201ENST00000379516 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
SNX2-201ENST00000379516 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
SNX2-201ENST00000379516 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 SGSM2O43147 1006 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
SNX2-201ENST00000379516 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 DIAPH3Q9NSV4 1193 aa18.29■□□□□ 0.52
SNX2-201ENST00000379516 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
SNX2-201ENST00000379516 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
SNX2-201ENST00000379516 ST18O60284 1047 aa18.28■□□□□ 0.52
SNX2-201ENST00000379516 GPTP24298 496 aa18.28■□□□□ 0.52
SNX2-201ENST00000379516 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
SNX2-201ENST00000379516 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
SNX2-201ENST00000379516 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
SNX2-201ENST00000379516 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
SNX2-201ENST00000379516 ZBTB38Q8NAP3 1195 aaPredicted RBP18.27■□□□□ 0.52
SNX2-201ENST00000379516 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
SNX2-201ENST00000379516 VPS72Q15906 364 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
SNX2-201ENST00000379516 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 ZNF594Q96JF6 807 aaPredicted RBP18.26■□□□□ 0.51
SNX2-201ENST00000379516 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
SNX2-201ENST00000379516 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 SIK1P57059 783 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 ATG9AQ7Z3C6 839 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 NLRP10Q86W26 655 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
SNX2-201ENST00000379516 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.25■□□□□ 0.51
SNX2-201ENST00000379516 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
SNX2-201ENST00000379516 ANAPC15P60006 121 aa18.25■□□□□ 0.51
SNX2-201ENST00000379516 KIAA1211Q6ZU35 1233 aa18.25■□□□□ 0.51
SNX2-201ENST00000379516 KCNQ2O43526 872 aa18.25■□□□□ 0.51
SNX2-201ENST00000379516 CCDC57Q2TAC2 916 aa18.25■□□□□ 0.51
SNX2-201ENST00000379516 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 EYA2O00167 538 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 DDIT3P35638 169 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
SNX2-201ENST00000379516 DBNDD2Q9BQY9 259 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 CCDC87Q9NVE4 849 aa18.24■□□□□ 0.51
SNX2-201ENST00000379516 ATP5JP18859 108 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 HSPA4P34932 840 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
SNX2-201ENST00000379516 NEK4P51957 841 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 SYNE4Q8N205 404 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
SNX2-201ENST00000379516 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
SNX2-201ENST00000379516 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
SNX2-201ENST00000379516 RAD50Q92878 1312 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 HIP1O00291 1037 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
SNX2-201ENST00000379516 NEUROD6Q96NK8 337 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
SNX2-201ENST00000379516 CIAO1O76071 339 aa18.22■□□□□ 0.51
SNX2-201ENST00000379516 ITPK1Q13572 414 aa18.22■□□□□ 0.51
SNX2-201ENST00000379516 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
SNX2-201ENST00000379516 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
SNX2-201ENST00000379516 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
SNX2-201ENST00000379516 USP21Q9UK80 565 aa18.22■□□□□ 0.51
SNX2-201ENST00000379516 CDHR2Q9BYE9 1310 aa18.22■□□□□ 0.51
SNX2-201ENST00000379516 CSF1RP07333 972 aa18.21■□□□□ 0.51
SNX2-201ENST00000379516 GPR108Q9NPR9 543 aa18.21■□□□□ 0.51
SNX2-201ENST00000379516 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
SNX2-201ENST00000379516 SPATA31A6Q5VVP1 1343 aa18.21■□□□□ 0.51
SNX2-201ENST00000379516 TIMM10P62072 90 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms