RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LRRC4BQ9NT99 713 aa30.5■■■□□ 2.47
ECHDC3-201ENST00000379215 NUP98P52948 1817 aa30.49■■■□□ 2.47
ECHDC3-201ENST00000379215 TXNRD1Q16881 649 aa30.49■■■□□ 2.47
ECHDC3-201ENST00000379215 RABL6Q3YEC7 729 aaPredicted RBP30.48■■■□□ 2.47
ECHDC3-201ENST00000379215 NARFQ9UHQ1 456 aa30.48■■■□□ 2.47
ECHDC3-201ENST00000379215 RGPD3A6NKT7 1758 aaPredicted RBP30.48■■■□□ 2.47
ECHDC3-201ENST00000379215 RGPD4Q7Z3J3 1758 aa30.48■■■□□ 2.47
ECHDC3-201ENST00000379215 RGS3P49796 1198 aa30.47■■■□□ 2.47
ECHDC3-201ENST00000379215 CDHR2Q9BYE9 1310 aa30.47■■■□□ 2.47
ECHDC3-201ENST00000379215 SCN7AQ01118 1682 aa30.47■■■□□ 2.47
ECHDC3-201ENST00000379215 RAB11FIP3O75154 756 aa30.47■■■□□ 2.47
ECHDC3-201ENST00000379215 GPTP24298 496 aa30.46■■■□□ 2.47
ECHDC3-201ENST00000379215 ZPR1O75312 459 aa30.45■■■□□ 2.47
ECHDC3-201ENST00000379215 TNS1Q9HBL0 1735 aaKnown RBP30.45■■■□□ 2.46
ECHDC3-201ENST00000379215 TRAPPC3LQ5T215 181 aa30.44■■■□□ 2.46
ECHDC3-201ENST00000379215 PLA2G12BQ9BX93 195 aa30.44■■■□□ 2.46
ECHDC3-201ENST00000379215 HSP90B1P14625 803 aaKnown RBP30.44■■■□□ 2.46
ECHDC3-201ENST00000379215 LNPKQ9C0E8 428 aa30.44■■■□□ 2.46
ECHDC3-201ENST00000379215 NOP58Q9Y2X3 529 aaKnown RBP30.44■■■□□ 2.46
ECHDC3-201ENST00000379215 SURF6O75683 361 aaKnown RBP30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 SSFA2P28290 1259 aa30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 LRRCC1Q9C099 1032 aa30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 TRMT112Q9UI30 125 aaKnown RBP30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 EXOC6BQ9Y2D4 811 aa30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 UBN2Q6ZU65 1347 aa30.42■■■□□ 2.46
ECHDC3-201ENST00000379215 EPHA10Q5JZY3 1008 aa30.41■■■□□ 2.46
ECHDC3-201ENST00000379215 ERC1Q8IUD2 1116 aa30.41■■■□□ 2.46
ECHDC3-201ENST00000379215 NIP7Q9Y221 180 aaKnown RBP eCLIP30.41■■■□□ 2.46
ECHDC3-201ENST00000379215 RFC4P35249 363 aa30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 SKAP1Q86WV1 359 aa30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 JARID2Q92833 1246 aaPredicted RBP30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 ARHGEF1Q92888 912 aaKnown RBP30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 UTP14AQ9BVJ6 771 aaKnown RBP30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 FOXO4P98177 505 aa30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 PROM2Q8N271 834 aa30.4■■■□□ 2.46
ECHDC3-201ENST00000379215 EP400Q96L91 3159 aa30.39■■■□□ 2.46
ECHDC3-201ENST00000379215 USP42Q9H9J4 1324 aaKnown RBP30.39■■■□□ 2.46
ECHDC3-201ENST00000379215 FAM89AQ96GI7 184 aa30.39■■■□□ 2.46
ECHDC3-201ENST00000379215 SH3TC1Q8TE82 1336 aa30.38■■■□□ 2.45
ECHDC3-201ENST00000379215 KIF1BPQ96EK5 621 aa30.38■■■□□ 2.45
ECHDC3-201ENST00000379215 PDE4AP27815 886 aa30.37■■■□□ 2.45
ECHDC3-201ENST00000379215 RTL5Q5HYW3 569 aaPredicted RBP30.37■■■□□ 2.45
ECHDC3-201ENST00000379215 USPL1Q5W0Q7 1092 aa30.37■■■□□ 2.45
ECHDC3-201ENST00000379215 LMBR1LQ6UX01 489 aa30.37■■■□□ 2.45
ECHDC3-201ENST00000379215 COPRSQ9NQ92 184 aa30.36■■■□□ 2.45
ECHDC3-201ENST00000379215 UBR3Q6ZT12 1888 aa30.36■■■□□ 2.45
ECHDC3-201ENST00000379215 OS9Q13438 667 aaPredicted RBP30.36■■■□□ 2.45
ECHDC3-201ENST00000379215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 IRS4O14654 1257 aaPredicted RBP30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 PHF14O94880 888 aa30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 SUSD4Q5VX71 490 aa30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 ILDR1Q86SU0 546 aaPredicted RBP30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 C4AP0C0L4 1744 aa30.35■■■□□ 2.45
ECHDC3-201ENST00000379215 APBB1O00213 710 aa30.34■■■□□ 2.45
ECHDC3-201ENST00000379215 G3BP1Q13283 466 aaKnown RBP eCLIP30.34■■■□□ 2.45
ECHDC3-201ENST00000379215 BCL2L12Q9HB09 334 aa30.34■■■□□ 2.45
ECHDC3-201ENST00000379215 PDE8AO60658 829 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 SF3B2Q13435 895 aaKnown RBP30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 NYXQ9GZU5 481 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 CHMP3Q9Y3E7 222 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 NTSR2O95665 410 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 RHPN1Q8TCX5 695 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 SETDB2Q96T68 719 aa30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 SRP68Q9UHB9 627 aaKnown RBP30.33■■■□□ 2.45
ECHDC3-201ENST00000379215 CSF1RP07333 972 aa30.32■■■□□ 2.44
ECHDC3-201ENST00000379215 RFX5P48382 616 aaPredicted RBP30.32■■■□□ 2.44
ECHDC3-201ENST00000379215 FLAD1Q8NFF5 587 aa30.32■■■□□ 2.44
ECHDC3-201ENST00000379215 AMIGO3Q86WK7 504 aa30.31■■■□□ 2.44
ECHDC3-201ENST00000379215 CTSWP56202 376 aa30.3■■■□□ 2.44
ECHDC3-201ENST00000379215 CCDC57Q2TAC2 916 aa30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 TBC1D9BQ66K14 1250 aa30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 AKT1S1Q96B36 256 aa30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 FBXO3Q9UK99 471 aa30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 PA2G4Q9UQ80 394 aaKnown RBP30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 SMARCA5O60264 1052 aaPredicted RBP30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 PTPN12Q05209 780 aaKnown RBP30.29■■■□□ 2.44
ECHDC3-201ENST00000379215 COL24A1Q17RW2 1714 aa30.28■■■□□ 2.44
ECHDC3-201ENST00000379215 SMIM5Q71RC9 77 aa30.28■■■□□ 2.44
ECHDC3-201ENST00000379215 TFCP2L1Q9NZI6 479 aa30.28■■■□□ 2.44
ECHDC3-201ENST00000379215 BAG6P46379 1132 aa30.27■■■□□ 2.44
ECHDC3-201ENST00000379215 IFIT5Q13325 482 aaKnown RBP30.26■■■□□ 2.44
ECHDC3-201ENST00000379215 CLASRPQ8N2M8 674 aaKnown RBP30.26■■■□□ 2.44
ECHDC3-201ENST00000379215 LAMB2P55268 1798 aa30.26■■■□□ 2.43
ECHDC3-201ENST00000379215 CARMIL3Q8ND23 1372 aa30.26■■■□□ 2.43
ECHDC3-201ENST00000379215 FAM161AQ3B820 660 aa30.25■■■□□ 2.43
ECHDC3-201ENST00000379215 PLEKHM2Q8IWE5 1019 aa30.25■■■□□ 2.43
ECHDC3-201ENST00000379215 TTLL11Q8NHH1 800 aa30.25■■■□□ 2.43
ECHDC3-201ENST00000379215 CAMKK2Q96RR4 588 aa30.25■■■□□ 2.43
ECHDC3-201ENST00000379215 FAM177BA6PVY3 158 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 CIAO1O76071 339 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 ZNF827Q17R98 1081 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 TPTE2Q6XPS3 522 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 BICDL1Q6ZP65 573 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 NBPF5PQ86XG9 351 aaPredicted RBP30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 SYNE4Q8N205 404 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 MYH3P11055 1940 aa30.24■■■□□ 2.43
ECHDC3-201ENST00000379215 GTF2E1P29083 439 aaPredicted RBP30.23■■■□□ 2.43
ECHDC3-201ENST00000379215 BMP2KLQ5H9B9 411 aa30.23■■■□□ 2.43
ECHDC3-201ENST00000379215 CCDC125Q86Z20 511 aa30.23■■■□□ 2.43
ECHDC3-201ENST00000379215 SIL1Q9H173 461 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms