RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RILPL2Q969X0 211 aa23.74■■□□□ 1.39
SSU72-204ENST00000378726 HSPA1LP34931 641 aa23.74■■□□□ 1.39
SSU72-204ENST00000378726 KCNQ2O43526 872 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 RFX5P48382 616 aaPredicted RBP23.73■■□□□ 1.39
SSU72-204ENST00000378726 FOXO4P98177 505 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 TRIM28Q13263 835 aaKnown RBP23.73■■□□□ 1.39
SSU72-204ENST00000378726 LMBR1LQ6UX01 489 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 MAP3K15Q6ZN16 1313 aa23.73■■□□□ 1.39
SSU72-204ENST00000378726 NUP188Q5SRE5 1749 aa23.72■■□□□ 1.39
SSU72-204ENST00000378726 PTPN12Q05209 780 aaKnown RBP23.72■■□□□ 1.39
SSU72-204ENST00000378726 PI4K2BQ8TCG2 481 aa23.72■■□□□ 1.39
SSU72-204ENST00000378726 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
SSU72-204ENST00000378726 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
SSU72-204ENST00000378726 SIK1P57059 783 aa23.71■■□□□ 1.39
SSU72-204ENST00000378726 GIGYF2Q6Y7W6 1299 aaKnown RBP23.71■■□□□ 1.39
SSU72-204ENST00000378726 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
SSU72-204ENST00000378726 HLFQ16534 295 aa23.71■■□□□ 1.39
SSU72-204ENST00000378726 MEX3CQ5U5Q3 659 aaKnown RBP23.71■■□□□ 1.39
SSU72-204ENST00000378726 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.7■■□□□ 1.38
SSU72-204ENST00000378726 AACSQ86V21 672 aa23.69■■□□□ 1.38
SSU72-204ENST00000378726 CHMP3Q9Y3E7 222 aa23.69■■□□□ 1.38
SSU72-204ENST00000378726 TTC41PQ6P2S7 1318 aa23.69■■□□□ 1.38
SSU72-204ENST00000378726 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
SSU72-204ENST00000378726 SMARCC1Q92922 1105 aaPredicted RBP23.68■■□□□ 1.38
SSU72-204ENST00000378726 EAF2Q96CJ1 260 aaPredicted RBP23.68■■□□□ 1.38
SSU72-204ENST00000378726 USP26Q9BXU7 913 aa23.68■■□□□ 1.38
SSU72-204ENST00000378726 INTS5Q6P9B9 1019 aaKnown RBP23.68■■□□□ 1.38
SSU72-204ENST00000378726 TBC1D2BQ9UPU7 963 aa23.68■■□□□ 1.38
SSU72-204ENST00000378726 ERC2O15083 957 aa23.67■■□□□ 1.38
SSU72-204ENST00000378726 MAP4K4O95819 1239 aaPredicted RBP23.67■■□□□ 1.38
SSU72-204ENST00000378726 HSP90AB3PQ58FF7 597 aa23.67■■□□□ 1.38
SSU72-204ENST00000378726 ECHDC1Q9NTX5 307 aa23.67■■□□□ 1.38
SSU72-204ENST00000378726 PALLDQ8WX93 1383 aa23.67■■□□□ 1.38
SSU72-204ENST00000378726 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
SSU72-204ENST00000378726 DZIP3Q86Y13 1208 aaKnown RBP23.67■■□□□ 1.38
SSU72-204ENST00000378726 FAM43AQ8N2R8 423 aa23.67■■□□□ 1.38
SSU72-204ENST00000378726 CCDC8Q9H0W5 538 aaPredicted RBP23.67■■□□□ 1.38
SSU72-204ENST00000378726 CHMLP26374 656 aa23.66■■□□□ 1.38
SSU72-204ENST00000378726 ITPK1Q13572 414 aa23.66■■□□□ 1.38
SSU72-204ENST00000378726 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
SSU72-204ENST00000378726 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
SSU72-204ENST00000378726 REC8O95072 547 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 MCM4P33991 863 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
SSU72-204ENST00000378726 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
SSU72-204ENST00000378726 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 KIF2CQ99661 725 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 ERVV-1B6SEH8 477 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
SSU72-204ENST00000378726 GPTP24298 496 aa23.65■■□□□ 1.38
SSU72-204ENST00000378726 ZBTB38Q8NAP3 1195 aaPredicted RBP23.64■■□□□ 1.38
SSU72-204ENST00000378726 TJP1Q07157 1748 aa23.64■■□□□ 1.38
SSU72-204ENST00000378726 NLRP10Q86W26 655 aa23.64■■□□□ 1.37
SSU72-204ENST00000378726 L1TD1Q5T7N2 865 aaKnown RBP23.63■■□□□ 1.37
SSU72-204ENST00000378726 CNTROBQ8N137 903 aa23.63■■□□□ 1.37
SSU72-204ENST00000378726 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
SSU72-204ENST00000378726 ESYT1Q9BSJ8 1104 aa23.63■■□□□ 1.37
SSU72-204ENST00000378726 TFCP2Q12800 502 aa23.63■■□□□ 1.37
SSU72-204ENST00000378726 CHMP5Q9NZZ3 219 aa23.63■■□□□ 1.37
SSU72-204ENST00000378726 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
SSU72-204ENST00000378726 AFF2P51816 1311 aa23.62■■□□□ 1.37
SSU72-204ENST00000378726 TLR7Q9NYK1 1049 aaKnown RBP23.61■■□□□ 1.37
SSU72-204ENST00000378726 TUBGCP6Q96RT7 1819 aa23.6■■□□□ 1.37
SSU72-204ENST00000378726 SYNE4Q8N205 404 aa23.6■■□□□ 1.37
SSU72-204ENST00000378726 PLA2G12BQ9BX93 195 aa23.6■■□□□ 1.37
SSU72-204ENST00000378726 TNNI3KQ59H18 835 aa23.59■■□□□ 1.37
SSU72-204ENST00000378726 PTF1AQ7RTS3 328 aa23.59■■□□□ 1.37
SSU72-204ENST00000378726 FPGT-TNNI3KV9GXZ4 949 aa23.59■■□□□ 1.37
SSU72-204ENST00000378726 ZNF594Q96JF6 807 aaPredicted RBP23.59■■□□□ 1.37
SSU72-204ENST00000378726 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.37
SSU72-204ENST00000378726 FAM182BQ5T319 152 aa23.58■■□□□ 1.37
SSU72-204ENST00000378726 ATG9AQ7Z3C6 839 aa23.58■■□□□ 1.37
SSU72-204ENST00000378726 HSCBQ8IWL3 235 aa23.58■■□□□ 1.37
SSU72-204ENST00000378726 TRMT112Q9UI30 125 aaKnown RBP23.58■■□□□ 1.37
SSU72-204ENST00000378726 ZNF34Q8IZ26 560 aa23.57■■□□□ 1.36
SSU72-204ENST00000378726 SNX21Q969T3 373 aa23.57■■□□□ 1.36
SSU72-204ENST00000378726 GZF1Q9H116 711 aaPredicted RBP23.57■■□□□ 1.36
SSU72-204ENST00000378726 CSF1RP07333 972 aa23.57■■□□□ 1.36
SSU72-204ENST00000378726 CDHR2Q9BYE9 1310 aa23.57■■□□□ 1.36
SSU72-204ENST00000378726 EYA2O00167 538 aa23.56■■□□□ 1.36
SSU72-204ENST00000378726 IL15P40933 162 aaPredicted RBP23.56■■□□□ 1.36
SSU72-204ENST00000378726 LRRC24Q50LG9 513 aa23.56■■□□□ 1.36
SSU72-204ENST00000378726 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
SSU72-204ENST00000378726 TRPC5Q9UL62 973 aaPredicted RBP23.56■■□□□ 1.36
SSU72-204ENST00000378726 FSD2A1L4K1 749 aa23.55■■□□□ 1.36
SSU72-204ENST00000378726 EVI5LQ96CN4 794 aa23.55■■□□□ 1.36
SSU72-204ENST00000378726 BOLA2Q9H3K6 86 aa23.55■■□□□ 1.36
SSU72-204ENST00000378726 DBNLQ9UJU6 430 aaKnown RBP23.55■■□□□ 1.36
SSU72-204ENST00000378726 XRCC6P12956 609 aaKnown RBP eCLIP23.55■■□□□ 1.36
SSU72-204ENST00000378726 KCNQ4P56696 695 aa23.55■■□□□ 1.36
SSU72-204ENST00000378726 ANO2Q9NQ90 1003 aa23.55■■□□□ 1.36
SSU72-204ENST00000378726 GOLGA6L3A6NEY3 463 aa23.54■■□□□ 1.36
SSU72-204ENST00000378726 IRS4O14654 1257 aaPredicted RBP23.54■■□□□ 1.36
SSU72-204ENST00000378726 TRAK2O60296 914 aa23.54■■□□□ 1.36
SSU72-204ENST00000378726 ONECUT3O60422 494 aaPredicted RBP23.54■■□□□ 1.36
SSU72-204ENST00000378726 UBN2Q6ZU65 1347 aa23.54■■□□□ 1.36
SSU72-204ENST00000378726 CIAO1O76071 339 aa23.53■■□□□ 1.36
SSU72-204ENST00000378726 CAMTA2O94983 1202 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms