RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 EPB41L2O43491 1005 aaKnown RBP24.38■■□□□ 1.49
CLN5-201ENST00000377453 RUFY2Q8WXA3 655 aa24.38■■□□□ 1.49
CLN5-201ENST00000377453 AP5Z1O43299 807 aa24.38■■□□□ 1.49
CLN5-201ENST00000377453 STK3Q13188 491 aa24.38■■□□□ 1.49
CLN5-201ENST00000377453 KDM3BQ7LBC6 1761 aa24.38■■□□□ 1.49
CLN5-201ENST00000377453 GRM8O00222 908 aa24.37■■□□□ 1.49
CLN5-201ENST00000377453 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
CLN5-201ENST00000377453 CCDC9Q9Y3X0 531 aaKnown RBP24.37■■□□□ 1.49
CLN5-201ENST00000377453 VPS53Q5VIR6 699 aa24.37■■□□□ 1.49
CLN5-201ENST00000377453 CDC37L1Q7L3B6 337 aa24.37■■□□□ 1.49
CLN5-201ENST00000377453 ZNF589Q86UQ0 364 aaPredicted RBP24.37■■□□□ 1.49
CLN5-201ENST00000377453 ANKLE2Q86XL3 938 aa24.37■■□□□ 1.49
CLN5-201ENST00000377453 TSC1Q92574 1164 aa24.36■■□□□ 1.49
CLN5-201ENST00000377453 EVI5LQ96CN4 794 aa24.36■■□□□ 1.49
CLN5-201ENST00000377453 IGKV5-2P06315 115 aa24.36■■□□□ 1.49
CLN5-201ENST00000377453 FSD1Q9BTV5 496 aa24.36■■□□□ 1.49
CLN5-201ENST00000377453 SLC27A2O14975 620 aa24.35■■□□□ 1.49
CLN5-201ENST00000377453 G3BP1Q13283 466 aaKnown RBP eCLIP24.35■■□□□ 1.49
CLN5-201ENST00000377453 GPATCH3Q96I76 525 aa24.35■■□□□ 1.49
CLN5-201ENST00000377453 ALDH1L1O75891 902 aa24.35■■□□□ 1.49
CLN5-201ENST00000377453 PDIA6Q15084 440 aa24.34■■□□□ 1.49
CLN5-201ENST00000377453 CAMK4Q16566 473 aa24.34■■□□□ 1.49
CLN5-201ENST00000377453 RIC3Q7Z5B4 369 aa24.33■■□□□ 1.49
CLN5-201ENST00000377453 ARHGEF25Q86VW2 580 aa24.33■■□□□ 1.49
CLN5-201ENST00000377453 ZC3H6P61129 1189 aaKnown RBP24.33■■□□□ 1.49
CLN5-201ENST00000377453 KIAA2012Q0VF49 1180 aa24.33■■□□□ 1.49
CLN5-201ENST00000377453 DNTTIP2Q5QJE6 756 aaKnown RBP24.33■■□□□ 1.49
CLN5-201ENST00000377453 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
CLN5-201ENST00000377453 LARP1BQ659C4 914 aaKnown RBP24.32■■□□□ 1.48
CLN5-201ENST00000377453 TTC6Q86TZ1 520 aa24.32■■□□□ 1.48
CLN5-201ENST00000377453 KCNH5Q8NCM2 988 aa24.32■■□□□ 1.48
CLN5-201ENST00000377453 LINS1Q8NG48 757 aa24.32■■□□□ 1.48
CLN5-201ENST00000377453 TFIP11Q9UBB9 837 aaKnown RBP24.32■■□□□ 1.48
CLN5-201ENST00000377453 CRYBG1Q9Y4K1 1723 aa24.32■■□□□ 1.48
CLN5-201ENST00000377453 MAP4K1Q92918 833 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 FUCA2Q9BTY2 467 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 FAM177BA6PVY3 158 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 MCM5P33992 734 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 ERC1Q8IUD2 1116 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 SPC24Q8NBT2 197 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 MYD88Q99836 296 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 LIG1P18858 919 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 AMOTQ4VCS5 1084 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 CCDC129Q6ZRS4 1044 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 XAGE3Q8WTP9 111 aa24.31■■□□□ 1.48
CLN5-201ENST00000377453 KCNB2Q92953 911 aa24.3■■□□□ 1.48
CLN5-201ENST00000377453 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
CLN5-201ENST00000377453 SLFNL1Q499Z3 407 aa24.29■■□□□ 1.48
CLN5-201ENST00000377453 COPS6Q7L5N1 327 aa24.29■■□□□ 1.48
CLN5-201ENST00000377453 SEC62Q99442 399 aaKnown RBP24.29■■□□□ 1.48
CLN5-201ENST00000377453 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
CLN5-201ENST00000377453 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
CLN5-201ENST00000377453 ATP6V1DQ9Y5K8 247 aa24.29■■□□□ 1.48
CLN5-201ENST00000377453 KDM4AO75164 1064 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 CSPP1Q1MSJ5 1256 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 ZSCAN31Q96LW9 406 aaPredicted RBP24.28■■□□□ 1.48
CLN5-201ENST00000377453 SH2B1Q9NRF2 756 aaPredicted RBP24.28■■□□□ 1.48
CLN5-201ENST00000377453 FOSBP53539 338 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 TOB2Q14106 344 aaPredicted RBP24.28■■□□□ 1.48
CLN5-201ENST00000377453 LARP1Q6PKG0 1096 aaKnown RBP24.28■■□□□ 1.48
CLN5-201ENST00000377453 USP54Q70EL1 1684 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 CKAP2LQ8IYA6 745 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 FAM184AQ8NB25 1140 aa24.28■■□□□ 1.48
CLN5-201ENST00000377453 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 HEG1Q9ULI3 1381 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.27■■□□□ 1.48
CLN5-201ENST00000377453 JAK2O60674 1132 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 PPFIA3O75145 1194 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 BLOC1S2Q6QNY1 142 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 NFATC2IPQ8NCF5 419 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 LRRC2Q9BYS8 371 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 PDCL3Q9H2J4 239 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 COL15A1P39059 1388 aa24.27■■□□□ 1.48
CLN5-201ENST00000377453 UVSSAQ2YD98 709 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 SASS6Q6UVJ0 657 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 DDX17Q92841 729 aaKnown RBP24.26■■□□□ 1.47
CLN5-201ENST00000377453 DDX11Q96FC9 970 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 NPHP4O75161 1426 aaPredicted RBP24.26■■□□□ 1.47
CLN5-201ENST00000377453 NEURL1BA8MQ27 555 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 ATP5J2-PTCD1G3V325 749 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 PTCD1O75127 700 aaKnown RBP24.26■■□□□ 1.47
CLN5-201ENST00000377453 GLIPR1L2Q4G1C9 344 aa24.26■■□□□ 1.47
CLN5-201ENST00000377453 DNAJC2Q99543 621 aaKnown RBP24.25■■□□□ 1.47
CLN5-201ENST00000377453 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
CLN5-201ENST00000377453 DDX58O95786 925 aaKnown RBP24.24■■□□□ 1.47
CLN5-201ENST00000377453 TERF1P54274 439 aa24.24■■□□□ 1.47
CLN5-201ENST00000377453 NOLC1Q14978 699 aaKnown RBP eCLIP24.24■■□□□ 1.47
CLN5-201ENST00000377453 ZNF790Q6PG37 636 aa24.24■■□□□ 1.47
CLN5-201ENST00000377453 DBNLQ9UJU6 430 aaKnown RBP24.24■■□□□ 1.47
CLN5-201ENST00000377453 RPS6KB1P23443 525 aa24.24■■□□□ 1.47
CLN5-201ENST00000377453 TFCP2Q12800 502 aa24.24■■□□□ 1.47
CLN5-201ENST00000377453 GCKRQ14397 625 aa24.23■■□□□ 1.47
CLN5-201ENST00000377453 ZNF496Q96IT1 587 aaPredicted RBP24.23■■□□□ 1.47
CLN5-201ENST00000377453 NLRP2Q9NX02 1062 aa24.23■■□□□ 1.47
CLN5-201ENST00000377453 PYCARDQ9ULZ3 195 aa24.23■■□□□ 1.47
CLN5-201ENST00000377453 KCNF1Q9H3M0 494 aa24.23■■□□□ 1.47
CLN5-201ENST00000377453 LUZP1Q86V48 1076 aa24.22■■□□□ 1.47
CLN5-201ENST00000377453 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
CLN5-201ENST00000377453 LETM1O95202 739 aaPredicted RBP24.22■■□□□ 1.47
CLN5-201ENST00000377453 UBE3BQ7Z3V4 1068 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms