RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 CCDC191Q8NCU4 936 aa28.52■■■□□ 2.16
CBWD1-203ENST00000377400 NEURL1BA8MQ27 555 aa28.51■■■□□ 2.15
CBWD1-203ENST00000377400 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
CBWD1-203ENST00000377400 ST5P78524 1137 aa28.5■■■□□ 2.15
CBWD1-203ENST00000377400 TRIM28Q13263 835 aaKnown RBP28.5■■■□□ 2.15
CBWD1-203ENST00000377400 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
CBWD1-203ENST00000377400 TNNQ9UQP3 1299 aa28.5■■■□□ 2.15
CBWD1-203ENST00000377400 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
CBWD1-203ENST00000377400 CCDC24Q8N4L8 307 aa28.5■■■□□ 2.15
CBWD1-203ENST00000377400 CCT4P50991 539 aaKnown RBP28.49■■■□□ 2.15
CBWD1-203ENST00000377400 DZIP1LQ8IYY4 767 aaKnown RBP28.49■■■□□ 2.15
CBWD1-203ENST00000377400 SGIP1Q9BQI5 828 aa28.49■■■□□ 2.15
CBWD1-203ENST00000377400 MS4A1P11836 297 aa28.48■■■□□ 2.15
CBWD1-203ENST00000377400 PRR5LQ6MZQ0 368 aa28.47■■■□□ 2.15
CBWD1-203ENST00000377400 PXDNLA1KZ92 1463 aa28.47■■■□□ 2.15
CBWD1-203ENST00000377400 FAM89AQ96GI7 184 aa28.47■■■□□ 2.15
CBWD1-203ENST00000377400 AFDNP55196 1824 aaKnown RBP28.46■■■□□ 2.15
CBWD1-203ENST00000377400 ABCC4O15439 1325 aa28.46■■■□□ 2.15
CBWD1-203ENST00000377400 ALDH1L1O75891 902 aa28.46■■■□□ 2.15
CBWD1-203ENST00000377400 NTSR2O95665 410 aa28.46■■■□□ 2.15
CBWD1-203ENST00000377400 GCKRQ14397 625 aa28.46■■■□□ 2.15
CBWD1-203ENST00000377400 C9orf78Q9NZ63 289 aaPredicted RBP28.46■■■□□ 2.15
CBWD1-203ENST00000377400 SH3TC1Q8TE82 1336 aa28.45■■■□□ 2.14
CBWD1-203ENST00000377400 RRP1P56182 461 aaKnown RBP28.45■■■□□ 2.14
CBWD1-203ENST00000377400 ERFEQ4G0M1 354 aa28.45■■■□□ 2.14
CBWD1-203ENST00000377400 JARID2Q92833 1246 aaPredicted RBP28.45■■■□□ 2.14
CBWD1-203ENST00000377400 COL24A1Q17RW2 1714 aa28.44■■■□□ 2.14
CBWD1-203ENST00000377400 ZBTB38Q8NAP3 1195 aaPredicted RBP28.44■■■□□ 2.14
CBWD1-203ENST00000377400 IBTKQ9P2D0 1353 aaPredicted RBP28.43■■■□□ 2.14
CBWD1-203ENST00000377400 ITPRIPQ8IWB1 547 aa28.43■■■□□ 2.14
CBWD1-203ENST00000377400 TMEM57Q8N5G2 664 aa28.43■■■□□ 2.14
CBWD1-203ENST00000377400 PANK1Q8TE04 598 aa28.43■■■□□ 2.14
CBWD1-203ENST00000377400 SUPT16HQ9Y5B9 1047 aaKnown RBP28.43■■■□□ 2.14
CBWD1-203ENST00000377400 UBE3BQ7Z3V4 1068 aa28.42■■■□□ 2.14
CBWD1-203ENST00000377400 RNF123Q5XPI4 1314 aa28.42■■■□□ 2.14
CBWD1-203ENST00000377400 PCCAP05165 728 aaPredicted RBP28.42■■■□□ 2.14
CBWD1-203ENST00000377400 INTS3Q68E01 1043 aaKnown RBP28.41■■■□□ 2.14
CBWD1-203ENST00000377400 SYNE4Q8N205 404 aa28.41■■■□□ 2.14
CBWD1-203ENST00000377400 GRM8O00222 908 aa28.4■■■□□ 2.14
CBWD1-203ENST00000377400 RLBP1P12271 317 aa28.4■■■□□ 2.14
CBWD1-203ENST00000377400 HCLS1P14317 486 aaPredicted RBP28.39■■■□□ 2.14
CBWD1-203ENST00000377400 SRCAPQ6ZRS2 3230 aa28.39■■■□□ 2.14
CBWD1-203ENST00000377400 ABCC12Q96J65 1359 aa28.39■■■□□ 2.13
CBWD1-203ENST00000377400 IRS4O14654 1257 aaPredicted RBP28.39■■■□□ 2.13
CBWD1-203ENST00000377400 HSP90B1P14625 803 aaKnown RBP28.38■■■□□ 2.13
CBWD1-203ENST00000377400 BRIP1Q9BX63 1249 aa28.37■■■□□ 2.13
CBWD1-203ENST00000377400 NRXN2Q9P2S2 1712 aa28.37■■■□□ 2.13
CBWD1-203ENST00000377400 PDE6BP35913 854 aa28.37■■■□□ 2.13
CBWD1-203ENST00000377400 PDE3AQ14432 1141 aa28.37■■■□□ 2.13
CBWD1-203ENST00000377400 C20orf194Q5TEA3 1177 aa28.37■■■□□ 2.13
CBWD1-203ENST00000377400 C10orf71Q711Q0 1435 aa28.36■■■□□ 2.13
CBWD1-203ENST00000377400 H7C1W4 665 aa28.36■■■□□ 2.13
CBWD1-203ENST00000377400 NLRP3Q96P20 1036 aa28.36■■■□□ 2.13
CBWD1-203ENST00000377400 FHDC1Q9C0D6 1143 aaPredicted RBP28.36■■■□□ 2.13
CBWD1-203ENST00000377400 COG6Q9Y2V7 657 aa28.36■■■□□ 2.13
CBWD1-203ENST00000377400 CD2APQ9Y5K6 639 aa28.35■■■□□ 2.13
CBWD1-203ENST00000377400 NBPF7P0C2Y1 421 aaPredicted RBP28.34■■■□□ 2.13
CBWD1-203ENST00000377400 UBTFL1P0CB47 393 aaPredicted RBP28.34■■■□□ 2.13
CBWD1-203ENST00000377400 USP44Q9H0E7 712 aa28.34■■■□□ 2.13
CBWD1-203ENST00000377400 CDHR2Q9BYE9 1310 aa28.33■■■□□ 2.13
CBWD1-203ENST00000377400 LRP5O75197 1615 aa28.33■■■□□ 2.13
CBWD1-203ENST00000377400 MVPQ14764 893 aaKnown RBP28.32■■■□□ 2.12
CBWD1-203ENST00000377400 SLC10A5Q5PT55 438 aa28.32■■■□□ 2.12
CBWD1-203ENST00000377400 N4BP2Q86UW6 1770 aaPredicted RBP28.32■■■□□ 2.12
CBWD1-203ENST00000377400 H0YIN7 160 aa28.32■■■□□ 2.12
CBWD1-203ENST00000377400 C2CD5Q86YS7 1000 aa28.32■■■□□ 2.12
CBWD1-203ENST00000377400 MEIS3Q99687 375 aa28.32■■■□□ 2.12
CBWD1-203ENST00000377400 PDE8AO60658 829 aa28.31■■■□□ 2.12
CBWD1-203ENST00000377400 GNAI3P08754 354 aa28.31■■■□□ 2.12
CBWD1-203ENST00000377400 RPGRQ92834 1020 aaKnown RBP28.3■■■□□ 2.12
CBWD1-203ENST00000377400 CHRNA5P30532 468 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 CASP7P55210 303 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 TGFB2P61812 414 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 DDX19BQ9UMR2 479 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 HDAC5Q9UQL6 1122 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 A0A0G2JLW4 131 aa28.29■■■□□ 2.12
CBWD1-203ENST00000377400 CCDC85AQ96PX6 553 aaPredicted RBP28.29■■■□□ 2.12
CBWD1-203ENST00000377400 UTYO14607 1347 aa28.28■■■□□ 2.12
CBWD1-203ENST00000377400 C3orf67Q6ZVT6 689 aa28.28■■■□□ 2.12
CBWD1-203ENST00000377400 ZNF622Q969S3 477 aaKnown RBP eCLIP28.28■■■□□ 2.12
CBWD1-203ENST00000377400 SUCLG2Q96I99 432 aa28.28■■■□□ 2.12
CBWD1-203ENST00000377400 CHMP3Q9Y3E7 222 aa28.28■■■□□ 2.12
CBWD1-203ENST00000377400 SYT17Q9BSW7 474 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 PDZRN3Q9UPQ7 1066 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 RIC1Q4ADV7 1423 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 DPEP1P16444 411 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 CTSWP56202 376 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 NLGN2Q8NFZ4 835 aa28.27■■■□□ 2.12
CBWD1-203ENST00000377400 TNRC6CQ9HCJ0 1690 aaKnown RBP28.26■■■□□ 2.11
CBWD1-203ENST00000377400 ANKRD31Q8N7Z5 1873 aa28.26■■■□□ 2.11
CBWD1-203ENST00000377400 CHMP4BQ9H444 224 aaKnown RBP28.26■■■□□ 2.11
CBWD1-203ENST00000377400 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
CBWD1-203ENST00000377400 CCDC152Q4G0S7 254 aa28.25■■■□□ 2.11
CBWD1-203ENST00000377400 DDX60Q8IY21 1712 aaKnown RBP28.25■■■□□ 2.11
CBWD1-203ENST00000377400 PLA2G12BQ9BX93 195 aa28.24■■■□□ 2.11
CBWD1-203ENST00000377400 LRRFIP2Q9Y608 721 aaKnown RBP28.24■■■□□ 2.11
CBWD1-203ENST00000377400 KIF13BQ9NQT8 1826 aa28.24■■■□□ 2.11
CBWD1-203ENST00000377400 ZBTB7BO15156 539 aaPredicted RBP28.24■■■□□ 2.11
CBWD1-203ENST00000377400 GNAI2P04899 355 aa28.24■■■□□ 2.11
CBWD1-203ENST00000377400 SRGNP10124 158 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms