RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 OSBPP22059 807 aa12.96□□□□□ -0.33
C9orf85-202ENST00000377027 NBR1Q14596 966 aa12.96□□□□□ -0.33
C9orf85-202ENST00000377027 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
C9orf85-202ENST00000377027 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
C9orf85-202ENST00000377027 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
C9orf85-202ENST00000377027 SCN7AQ01118 1682 aa12.96□□□□□ -0.34
C9orf85-202ENST00000377027 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
C9orf85-202ENST00000377027 DPEP1P16444 411 aa12.95□□□□□ -0.34
C9orf85-202ENST00000377027 RFC4P35249 363 aa12.95□□□□□ -0.34
C9orf85-202ENST00000377027 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
C9orf85-202ENST00000377027 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
C9orf85-202ENST00000377027 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
C9orf85-202ENST00000377027 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
C9orf85-202ENST00000377027 TGFB2P61812 414 aa12.94□□□□□ -0.34
C9orf85-202ENST00000377027 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
C9orf85-202ENST00000377027 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
C9orf85-202ENST00000377027 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
C9orf85-202ENST00000377027 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
C9orf85-202ENST00000377027 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
C9orf85-202ENST00000377027 BCORQ6W2J9 1755 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 TM4SF1P30408 202 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 PBX2P40425 430 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
C9orf85-202ENST00000377027 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 COL15A1P39059 1388 aa12.92□□□□□ -0.34
C9orf85-202ENST00000377027 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
C9orf85-202ENST00000377027 CHRNA5P30532 468 aa12.9□□□□□ -0.34
C9orf85-202ENST00000377027 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
C9orf85-202ENST00000377027 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
C9orf85-202ENST00000377027 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
C9orf85-202ENST00000377027 PCNTO95613 3336 aa12.9□□□□□ -0.34
C9orf85-202ENST00000377027 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
C9orf85-202ENST00000377027 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
C9orf85-202ENST00000377027 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
C9orf85-202ENST00000377027 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 FCHSD2O94868 740 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 PTPREP23469 700 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 PSEN2P49810 448 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 NFIXQ14938 502 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
C9orf85-202ENST00000377027 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
C9orf85-202ENST00000377027 MAP3K7O43318 606 aa12.87□□□□□ -0.35
C9orf85-202ENST00000377027 PRELPP51888 382 aa12.87□□□□□ -0.35
C9orf85-202ENST00000377027 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
C9orf85-202ENST00000377027 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
C9orf85-202ENST00000377027 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
C9orf85-202ENST00000377027 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
C9orf85-202ENST00000377027 KCNQ3O43525 872 aa12.86□□□□□ -0.35
C9orf85-202ENST00000377027 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
C9orf85-202ENST00000377027 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
C9orf85-202ENST00000377027 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
C9orf85-202ENST00000377027 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 HSPA6P17066 643 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
C9orf85-202ENST00000377027 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
C9orf85-202ENST00000377027 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 ZPR1O75312 459 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 CANXP27824 592 aaKnown RBP12.84□□□□□ -0.35
C9orf85-202ENST00000377027 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
C9orf85-202ENST00000377027 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 SERPINB2P05120 415 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
C9orf85-202ENST00000377027 RASSF7Q02833 373 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
C9orf85-202ENST00000377027 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
C9orf85-202ENST00000377027 DICER1Q9UPY3 1922 aaKnown RBP12.83□□□□□ -0.36
C9orf85-202ENST00000377027 COL9A1P20849 921 aa12.82□□□□□ -0.36
C9orf85-202ENST00000377027 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
C9orf85-202ENST00000377027 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
C9orf85-202ENST00000377027 A1BGP04217 495 aa12.81□□□□□ -0.36
C9orf85-202ENST00000377027 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
C9orf85-202ENST00000377027 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
C9orf85-202ENST00000377027 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 TEFQ10587 303 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 TBC1D2BQ9UPU7 963 aa12.8□□□□□ -0.36
C9orf85-202ENST00000377027 NFKBIEO00221 500 aa12.79□□□□□ -0.36
C9orf85-202ENST00000377027 TOMM70O94826 608 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms