RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 RASEFQ8IZ41 740 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 ITGB4P16144 1822 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 COL14A1Q05707 1796 aaKnown RBP26.27■■□□□ 1.8
RNF39-202ENST00000376751 H7C1W4 665 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 ZBTB3Q9H5J0 574 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 ZDHHC9Q9Y397 364 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 ROBO1Q9Y6N7 1651 aa26.27■■□□□ 1.8
RNF39-202ENST00000376751 FOXO4P98177 505 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 PTH1RQ03431 593 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 TMOD3Q9NYL9 352 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 COL16A1Q07092 1604 aaPredicted RBP26.26■■□□□ 1.79
RNF39-202ENST00000376751 TFCP2Q12800 502 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 KIAA1211Q6ZU35 1233 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 BOLA2Q9H3K6 86 aa26.26■■□□□ 1.79
RNF39-202ENST00000376751 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
RNF39-202ENST00000376751 LMBR1LQ6UX01 489 aa26.25■■□□□ 1.79
RNF39-202ENST00000376751 RUFY2Q8WXA3 655 aa26.25■■□□□ 1.79
RNF39-202ENST00000376751 CWC25Q9NXE8 425 aaPredicted RBP26.24■■□□□ 1.79
RNF39-202ENST00000376751 TNNI3KQ59H18 835 aa26.24■■□□□ 1.79
RNF39-202ENST00000376751 FAM227BQ96M60 508 aa26.24■■□□□ 1.79
RNF39-202ENST00000376751 DBNLQ9UJU6 430 aaKnown RBP26.24■■□□□ 1.79
RNF39-202ENST00000376751 FPGT-TNNI3KV9GXZ4 949 aa26.24■■□□□ 1.79
RNF39-202ENST00000376751 FSD2A1L4K1 749 aa26.23■■□□□ 1.79
RNF39-202ENST00000376751 NMIQ13287 307 aaPredicted RBP26.23■■□□□ 1.79
RNF39-202ENST00000376751 PIGBQ92521 554 aa26.23■■□□□ 1.79
RNF39-202ENST00000376751 ASAP1Q9ULH1 1129 aa26.23■■□□□ 1.79
RNF39-202ENST00000376751 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
RNF39-202ENST00000376751 COL22A1Q8NFW1 1626 aaPredicted RBP26.21■■□□□ 1.79
RNF39-202ENST00000376751 PLCH1Q4KWH8 1693 aa26.21■■□□□ 1.79
RNF39-202ENST00000376751 TTC14Q96N46 770 aa26.21■■□□□ 1.79
RNF39-202ENST00000376751 PTMSP20962 102 aa26.2■■□□□ 1.79
RNF39-202ENST00000376751 IL27Q8NEV9 243 aa26.2■■□□□ 1.79
RNF39-202ENST00000376751 AHDC1Q5TGY3 1603 aaPredicted RBP26.2■■□□□ 1.79
RNF39-202ENST00000376751 DNAJC10Q8IXB1 793 aa26.2■■□□□ 1.78
RNF39-202ENST00000376751 EDC3Q96F86 508 aaKnown RBP26.2■■□□□ 1.78
RNF39-202ENST00000376751 CCDC171Q6TFL3 1326 aa26.2■■□□□ 1.78
RNF39-202ENST00000376751 A0A0D9SFI3 127 aa26.19■■□□□ 1.78
RNF39-202ENST00000376751 CCDC191Q8NCU4 936 aa26.19■■□□□ 1.78
RNF39-202ENST00000376751 WNK3Q9BYP7 1800 aa26.19■■□□□ 1.78
RNF39-202ENST00000376751 INTS4Q96HW7 963 aaKnown RBP26.18■■□□□ 1.78
RNF39-202ENST00000376751 FSD1Q9BTV5 496 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 ATG3Q9NT62 314 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 CHMP3Q9Y3E7 222 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 HIP1O00291 1037 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 SKOR2Q2VWA4 1001 aaPredicted RBP26.18■■□□□ 1.78
RNF39-202ENST00000376751 MCTP1Q6DN14 999 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 PRPF40BQ6NWY9 871 aaKnown RBP26.18■■□□□ 1.78
RNF39-202ENST00000376751 KCNB2Q92953 911 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 SNRKQ9NRH2 765 aa26.18■■□□□ 1.78
RNF39-202ENST00000376751 GOLGA6L22H0YM25 854 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 CPA1P15085 419 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 ATP5JP18859 108 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
RNF39-202ENST00000376751 ARXQ96QS3 562 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 DBNDD2Q9BQY9 259 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 MED23Q9ULK4 1368 aa26.17■■□□□ 1.78
RNF39-202ENST00000376751 GOLGA6L3A6NEY3 463 aa26.16■■□□□ 1.78
RNF39-202ENST00000376751 ATG9AQ7Z3C6 839 aa26.16■■□□□ 1.78
RNF39-202ENST00000376751 ISCA1Q9BUE6 129 aa26.16■■□□□ 1.78
RNF39-202ENST00000376751 AK2P54819 239 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 ADCK5Q3MIX3 580 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 CHAMP1Q96JM3 812 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 ZNF330Q9Y3S2 320 aaPredicted RBP26.15■■□□□ 1.78
RNF39-202ENST00000376751 NDUFB9Q9Y6M9 179 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 KAT6BQ8WYB5 2073 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 NECTIN1Q15223 517 aa26.15■■□□□ 1.78
RNF39-202ENST00000376751 RBM8AQ9Y5S9 174 aaKnown RBP26.15■■□□□ 1.78
RNF39-202ENST00000376751 LRP6O75581 1613 aa26.14■■□□□ 1.78
RNF39-202ENST00000376751 CASTP20810 708 aaKnown RBP26.14■■□□□ 1.77
RNF39-202ENST00000376751 FOXD4L5Q5VV16 416 aaPredicted RBP26.14■■□□□ 1.77
RNF39-202ENST00000376751 RUFY3Q7L099 469 aa26.14■■□□□ 1.77
RNF39-202ENST00000376751 VSIG10Q8N0Z9 540 aa26.14■■□□□ 1.77
RNF39-202ENST00000376751 FOXD4L4Q8WXT5 416 aaPredicted RBP26.14■■□□□ 1.77
RNF39-202ENST00000376751 BCL9O00512 1426 aa26.13■■□□□ 1.77
RNF39-202ENST00000376751 BRD1O95696 1058 aa26.13■■□□□ 1.77
RNF39-202ENST00000376751 TCIRG1Q13488 830 aa26.13■■□□□ 1.77
RNF39-202ENST00000376751 MAP4K1Q92918 833 aa26.13■■□□□ 1.77
RNF39-202ENST00000376751 JAKMIP1Q96N16 626 aaKnown RBP26.13■■□□□ 1.77
RNF39-202ENST00000376751 LARP6Q9BRS8 491 aaKnown RBP26.13■■□□□ 1.77
RNF39-202ENST00000376751 LMBRD1Q9NUN5 540 aa26.13■■□□□ 1.77
RNF39-202ENST00000376751 ZNF589Q86UQ0 364 aaPredicted RBP26.12■■□□□ 1.77
RNF39-202ENST00000376751 ZNF594Q96JF6 807 aaPredicted RBP26.12■■□□□ 1.77
RNF39-202ENST00000376751 JCADQ9P266 1359 aa26.12■■□□□ 1.77
RNF39-202ENST00000376751 XRCC6P12956 609 aaKnown RBP eCLIP26.11■■□□□ 1.77
RNF39-202ENST00000376751 CREB3L3Q68CJ9 461 aa26.11■■□□□ 1.77
RNF39-202ENST00000376751 SLC4A9Q96Q91 983 aa26.11■■□□□ 1.77
RNF39-202ENST00000376751 TEX13AQ9BXU3 409 aaPredicted RBP26.11■■□□□ 1.77
RNF39-202ENST00000376751 KLHL40Q2TBA0 621 aa26.1■■□□□ 1.77
RNF39-202ENST00000376751 LRRC24Q50LG9 513 aa26.1■■□□□ 1.77
RNF39-202ENST00000376751 DNAJC2Q99543 621 aaKnown RBP26.09■■□□□ 1.77
RNF39-202ENST00000376751 HAUS7Q99871 368 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 TM6SF1Q9BZW5 370 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 ZSWIM6Q9HCJ5 1215 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 ZNF609O15014 1411 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 LARGE1O95461 756 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 CHGBP05060 677 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 LIMCH1Q9UPQ0 1083 aa26.09■■□□□ 1.77
RNF39-202ENST00000376751 CCDC9Q9Y3X0 531 aaKnown RBP26.09■■□□□ 1.77
RNF39-202ENST00000376751 DDX49Q9Y6V7 483 aaKnown RBP26.09■■□□□ 1.77
RNF39-202ENST00000376751 DOT1LQ8TEK3 1739 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms