RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 HSP90AB3PQ58FF7 597 aa18.44■□□□□ 0.54
CLCN6-203ENST00000376490 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
CLCN6-203ENST00000376490 ZNF428Q96B54 188 aa18.44■□□□□ 0.54
CLCN6-203ENST00000376490 UTP14AQ9BVJ6 771 aaKnown RBP18.44■□□□□ 0.54
CLCN6-203ENST00000376490 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
CLCN6-203ENST00000376490 NFKBIEO00221 500 aa18.43■□□□□ 0.54
CLCN6-203ENST00000376490 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
CLCN6-203ENST00000376490 TAF1P21675 1872 aa18.43■□□□□ 0.54
CLCN6-203ENST00000376490 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
CLCN6-203ENST00000376490 CRY2Q49AN0 593 aa18.42■□□□□ 0.54
CLCN6-203ENST00000376490 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
CLCN6-203ENST00000376490 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
CLCN6-203ENST00000376490 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
CLCN6-203ENST00000376490 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
CLCN6-203ENST00000376490 LMNB1P20700 586 aa18.41■□□□□ 0.54
CLCN6-203ENST00000376490 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
CLCN6-203ENST00000376490 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
CLCN6-203ENST00000376490 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
CLCN6-203ENST00000376490 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
CLCN6-203ENST00000376490 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-203ENST00000376490 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
CLCN6-203ENST00000376490 RIC3Q7Z5B4 369 aa18.4■□□□□ 0.54
CLCN6-203ENST00000376490 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-203ENST00000376490 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
CLCN6-203ENST00000376490 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
CLCN6-203ENST00000376490 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
CLCN6-203ENST00000376490 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
CLCN6-203ENST00000376490 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
CLCN6-203ENST00000376490 CHMP4AQ9BY43 222 aa18.39■□□□□ 0.53
CLCN6-203ENST00000376490 TIAM2Q8IVF5 1701 aa18.39■□□□□ 0.53
CLCN6-203ENST00000376490 DDX60Q8IY21 1712 aaKnown RBP18.39■□□□□ 0.53
CLCN6-203ENST00000376490 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
CLCN6-203ENST00000376490 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-203ENST00000376490 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
CLCN6-203ENST00000376490 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
CLCN6-203ENST00000376490 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
CLCN6-203ENST00000376490 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
CLCN6-203ENST00000376490 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
CLCN6-203ENST00000376490 RBM17Q96I25 401 aaKnown RBP18.37■□□□□ 0.53
CLCN6-203ENST00000376490 CCDC93Q567U6 631 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 RNF123Q5XPI4 1314 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 TAOK3Q9H2K8 898 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 NMRK2Q9NPI5 230 aa18.36■□□□□ 0.53
CLCN6-203ENST00000376490 LTBP3Q9NS15 1303 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 KIF3CO14782 793 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 VAMP4O75379 141 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 TRIM28Q13263 835 aaKnown RBP18.35■□□□□ 0.53
CLCN6-203ENST00000376490 RTL5Q5HYW3 569 aaPredicted RBP18.35■□□□□ 0.53
CLCN6-203ENST00000376490 G2E3Q7L622 706 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 MYD88Q99836 296 aa18.35■□□□□ 0.53
CLCN6-203ENST00000376490 CCER2I3L3R5 266 aa18.33■□□□□ 0.52
CLCN6-203ENST00000376490 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.52
CLCN6-203ENST00000376490 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
CLCN6-203ENST00000376490 RTKN2Q8IZC4 609 aa18.33■□□□□ 0.52
CLCN6-203ENST00000376490 METTL22Q9BUU2 404 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-203ENST00000376490 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
CLCN6-203ENST00000376490 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 PI4KAP2A4QPH2 592 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLCN6-203ENST00000376490 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 PI4KAP1Q8N8J0 262 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 RRAGCQ9HB90 399 aa18.32■□□□□ 0.52
CLCN6-203ENST00000376490 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
CLCN6-203ENST00000376490 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
CLCN6-203ENST00000376490 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
CLCN6-203ENST00000376490 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
CLCN6-203ENST00000376490 ABCC4O15439 1325 aa18.3■□□□□ 0.52
CLCN6-203ENST00000376490 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
CLCN6-203ENST00000376490 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
CLCN6-203ENST00000376490 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
CLCN6-203ENST00000376490 CC2D2BQ6DHV5 1058 aa18.29■□□□□ 0.52
CLCN6-203ENST00000376490 DDX46Q7L014 1031 aaKnown RBP18.29■□□□□ 0.52
CLCN6-203ENST00000376490 ZBTB38Q8NAP3 1195 aaPredicted RBP18.29■□□□□ 0.52
CLCN6-203ENST00000376490 SNED1Q8TER0 1413 aa18.29■□□□□ 0.52
CLCN6-203ENST00000376490 MYH3P11055 1940 aa18.28■□□□□ 0.52
CLCN6-203ENST00000376490 BBOX1O75936 387 aa18.28■□□□□ 0.52
CLCN6-203ENST00000376490 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
CLCN6-203ENST00000376490 FLIIQ13045 1269 aa18.28■□□□□ 0.52
CLCN6-203ENST00000376490 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
CLCN6-203ENST00000376490 CWC25Q9NXE8 425 aaPredicted RBP18.28■□□□□ 0.52
CLCN6-203ENST00000376490 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
CLCN6-203ENST00000376490 PSMD1Q99460 953 aa18.27■□□□□ 0.52
CLCN6-203ENST00000376490 ATP6V0A2Q9Y487 856 aa18.27■□□□□ 0.52
CLCN6-203ENST00000376490 TOMM70O94826 608 aa18.26■□□□□ 0.51
CLCN6-203ENST00000376490 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
CLCN6-203ENST00000376490 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
CLCN6-203ENST00000376490 GRAPQ13588 217 aa18.26■□□□□ 0.51
CLCN6-203ENST00000376490 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
CLCN6-203ENST00000376490 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CLCN6-203ENST00000376490 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
CLCN6-203ENST00000376490 MIER1Q8N108 512 aa18.26■□□□□ 0.51
CLCN6-203ENST00000376490 GRAPLQ8TC17 118 aaPredicted RBP18.26■□□□□ 0.51
CLCN6-203ENST00000376490 COL4A1P02462 1669 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms