RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 ZNF784Q8NCA9 323 aaPredicted RBP27.98■■■□□ 2.07
NINJ1-201ENST00000375446 ISCA1Q9BUE6 129 aa27.98■■■□□ 2.07
NINJ1-201ENST00000375446 RIC1Q4ADV7 1423 aa27.98■■■□□ 2.07
NINJ1-201ENST00000375446 RNF123Q5XPI4 1314 aa27.97■■■□□ 2.07
NINJ1-201ENST00000375446 DDX58O95786 925 aaKnown RBP27.97■■■□□ 2.07
NINJ1-201ENST00000375446 ATP5J2-PTCD1G3V325 749 aa27.96■■■□□ 2.07
NINJ1-201ENST00000375446 CRY2Q49AN0 593 aa27.96■■■□□ 2.07
NINJ1-201ENST00000375446 PRPF40BQ6NWY9 871 aaKnown RBP27.96■■■□□ 2.07
NINJ1-201ENST00000375446 TRMT112Q9UI30 125 aaKnown RBP27.96■■■□□ 2.07
NINJ1-201ENST00000375446 SLC4A2P04920 1241 aa27.95■■■□□ 2.06
NINJ1-201ENST00000375446 SLC10A5Q5PT55 438 aa27.95■■■□□ 2.06
NINJ1-201ENST00000375446 ANKRD36CQ5JPF3 1778 aa27.94■■■□□ 2.06
NINJ1-201ENST00000375446 C21orf2O43822 256 aa27.94■■■□□ 2.06
NINJ1-201ENST00000375446 TRIM28Q13263 835 aaKnown RBP27.94■■■□□ 2.06
NINJ1-201ENST00000375446 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
NINJ1-201ENST00000375446 TNRC6CQ9HCJ0 1690 aaKnown RBP27.94■■■□□ 2.06
NINJ1-201ENST00000375446 ZNF428Q96B54 188 aa27.93■■■□□ 2.06
NINJ1-201ENST00000375446 SH3TC1Q8TE82 1336 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 ADCY9O60503 1353 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 E9PSI1 815 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 G2E3Q7L622 706 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 SYNE4Q8N205 404 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 MYD88Q99836 296 aa27.92■■■□□ 2.06
NINJ1-201ENST00000375446 ALDH1B1P30837 517 aa27.91■■■□□ 2.06
NINJ1-201ENST00000375446 KSR2Q6VAB6 950 aa27.91■■■□□ 2.06
NINJ1-201ENST00000375446 C3orf67Q6ZVT6 689 aa27.91■■■□□ 2.06
NINJ1-201ENST00000375446 RPGRQ92834 1020 aaKnown RBP27.91■■■□□ 2.06
NINJ1-201ENST00000375446 NLRP3Q96P20 1036 aa27.91■■■□□ 2.06
NINJ1-201ENST00000375446 MAP3K2Q9Y2U5 619 aa27.91■■■□□ 2.06
NINJ1-201ENST00000375446 RASSF7Q02833 373 aa27.9■■■□□ 2.06
NINJ1-201ENST00000375446 C9orf131Q5VYM1 1079 aa27.9■■■□□ 2.06
NINJ1-201ENST00000375446 METTL22Q9BUU2 404 aaPredicted RBP27.9■■■□□ 2.06
NINJ1-201ENST00000375446 ARFGEF2Q9Y6D5 1785 aa27.9■■■□□ 2.06
NINJ1-201ENST00000375446 PI4KAP2A4QPH2 592 aa27.89■■■□□ 2.06
NINJ1-201ENST00000375446 HCLS1P14317 486 aaPredicted RBP27.89■■■□□ 2.06
NINJ1-201ENST00000375446 HOXA10P31260 410 aaPredicted RBP27.89■■■□□ 2.06
NINJ1-201ENST00000375446 SLFN5Q08AF3 891 aa27.89■■■□□ 2.06
NINJ1-201ENST00000375446 PI4KAP1Q8N8J0 262 aa27.89■■■□□ 2.06
NINJ1-201ENST00000375446 C7orf43Q8WVR3 580 aa27.89■■■□□ 2.06
NINJ1-201ENST00000375446 NFKBIEO00221 500 aa27.88■■■□□ 2.05
NINJ1-201ENST00000375446 FLIIQ13045 1269 aa27.88■■■□□ 2.05
NINJ1-201ENST00000375446 SOGA3Q5TF21 947 aa27.88■■■□□ 2.05
NINJ1-201ENST00000375446 SLX4Q8IY92 1834 aa27.88■■■□□ 2.05
NINJ1-201ENST00000375446 FAM89AQ96GI7 184 aa27.87■■■□□ 2.05
NINJ1-201ENST00000375446 RBM17Q96I25 401 aaKnown RBP27.87■■■□□ 2.05
NINJ1-201ENST00000375446 RNF181Q9P0P0 153 aa27.87■■■□□ 2.05
NINJ1-201ENST00000375446 CCDC191Q8NCU4 936 aa27.86■■■□□ 2.05
NINJ1-201ENST00000375446 CDCA7LQ96GN5 454 aa27.86■■■□□ 2.05
NINJ1-201ENST00000375446 CRAMP1Q96RY5 1269 aa27.86■■■□□ 2.05
NINJ1-201ENST00000375446 LMNB1P20700 586 aa27.84■■■□□ 2.05
NINJ1-201ENST00000375446 FKBP5Q13451 457 aaPredicted RBP27.84■■■□□ 2.05
NINJ1-201ENST00000375446 CCDC93Q567U6 631 aa27.84■■■□□ 2.05
NINJ1-201ENST00000375446 CWC25Q9NXE8 425 aaPredicted RBP27.84■■■□□ 2.05
NINJ1-201ENST00000375446 PRELPP51888 382 aa27.83■■■□□ 2.05
NINJ1-201ENST00000375446 NEXNQ0ZGT2 675 aa27.83■■■□□ 2.05
NINJ1-201ENST00000375446 RTL5Q5HYW3 569 aaPredicted RBP27.83■■■□□ 2.05
NINJ1-201ENST00000375446 ZBTB38Q8NAP3 1195 aaPredicted RBP27.83■■■□□ 2.05
NINJ1-201ENST00000375446 TAOK3Q9H2K8 898 aa27.82■■■□□ 2.04
NINJ1-201ENST00000375446 IRS4O14654 1257 aaPredicted RBP27.81■■■□□ 2.04
NINJ1-201ENST00000375446 IGKV5-2P06315 115 aa27.81■■■□□ 2.04
NINJ1-201ENST00000375446 OLFM4Q6UX06 510 aa27.81■■■□□ 2.04
NINJ1-201ENST00000375446 ZNF526Q8TF50 670 aaPredicted RBP27.81■■■□□ 2.04
NINJ1-201ENST00000375446 LTBP3Q9NS15 1303 aa27.81■■■□□ 2.04
NINJ1-201ENST00000375446 PCCAP05165 728 aaPredicted RBP27.8■■■□□ 2.04
NINJ1-201ENST00000375446 TRMT2AQ8IZ69 625 aaKnown RBP27.8■■■□□ 2.04
NINJ1-201ENST00000375446 CACNA1SQ13698 1873 aa27.79■■■□□ 2.04
NINJ1-201ENST00000375446 RTKN2Q8IZC4 609 aa27.79■■■□□ 2.04
NINJ1-201ENST00000375446 DNAAF4Q8WXU2 420 aa27.79■■■□□ 2.04
NINJ1-201ENST00000375446 ABCC4O15439 1325 aa27.78■■■□□ 2.04
NINJ1-201ENST00000375446 PPEF1O14829 653 aaPredicted RBP27.78■■■□□ 2.04
NINJ1-201ENST00000375446 DDX46Q7L014 1031 aaKnown RBP27.78■■■□□ 2.04
NINJ1-201ENST00000375446 GPBP1L1Q9HC44 474 aaPredicted RBP27.78■■■□□ 2.04
NINJ1-201ENST00000375446 NEURL1BA8MQ27 555 aa27.77■■■□□ 2.04
NINJ1-201ENST00000375446 HSP90B1P14625 803 aaKnown RBP27.77■■■□□ 2.04
NINJ1-201ENST00000375446 SF3B3Q15393 1217 aaKnown RBP27.77■■■□□ 2.04
NINJ1-201ENST00000375446 CWF19L2Q2TBE0 894 aaKnown RBP27.77■■■□□ 2.04
NINJ1-201ENST00000375446 CC2D2BQ6DHV5 1058 aa27.77■■■□□ 2.04
NINJ1-201ENST00000375446 FKBP4Q02790 459 aaKnown RBP eCLIP27.76■■■□□ 2.034e-6■■■■■ 31.1
NINJ1-201ENST00000375446 JARID2Q92833 1246 aaPredicted RBP27.76■■■□□ 2.03
NINJ1-201ENST00000375446 FER1L6Q2WGJ9 1857 aa27.76■■■□□ 2.03
NINJ1-201ENST00000375446 ZC3H4Q9UPT8 1303 aaKnown RBP27.75■■■□□ 2.03
NINJ1-201ENST00000375446 SBF1O95248 1867 aa27.75■■■□□ 2.03
NINJ1-201ENST00000375446 CACNA1FO60840 1977 aa27.75■■■□□ 2.03
NINJ1-201ENST00000375446 BBOX1O75936 387 aa27.74■■■□□ 2.03
NINJ1-201ENST00000375446 LINS1Q8NG48 757 aa27.74■■■□□ 2.03
NINJ1-201ENST00000375446 DDX60Q8IY21 1712 aaKnown RBP27.73■■■□□ 2.03
NINJ1-201ENST00000375446 F6X3S4 739 aa27.73■■■□□ 2.03
NINJ1-201ENST00000375446 GRAPQ13588 217 aa27.73■■■□□ 2.03
NINJ1-201ENST00000375446 GRAPLQ8TC17 118 aaPredicted RBP27.73■■■□□ 2.03
NINJ1-201ENST00000375446 ATP6V0A2Q9Y487 856 aa27.73■■■□□ 2.03
NINJ1-201ENST00000375446 LAMB2P55268 1798 aa27.73■■■□□ 2.03
NINJ1-201ENST00000375446 CDHR2Q9BYE9 1310 aa27.72■■■□□ 2.03
NINJ1-201ENST00000375446 HNRNPUQ00839 825 aaKnown RBP eCLIP27.72■■■□□ 2.03
NINJ1-201ENST00000375446 GRIPAP1Q4V328 841 aa27.72■■■□□ 2.03
NINJ1-201ENST00000375446 SLC51AQ86UW1 340 aa27.72■■■□□ 2.03
NINJ1-201ENST00000375446 MRPL50Q8N5N7 158 aaKnown RBP27.72■■■□□ 2.03
NINJ1-201ENST00000375446 SNED1Q8TER0 1413 aa27.72■■■□□ 2.03
NINJ1-201ENST00000375446 PDE8AO60658 829 aa27.71■■■□□ 2.03
NINJ1-201ENST00000375446 GCKRQ14397 625 aa27.71■■■□□ 2.03
NINJ1-201ENST00000375446 SSH1Q8WYL5 1049 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms