RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SMC2O95347 1197 aa21.11■□□□□ 0.97
PTPDC1-202ENST00000375360 BRF1Q92994 677 aa21.11■□□□□ 0.97
PTPDC1-202ENST00000375360 CCDC192P0DO97 292 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 NOC3LQ8WTT2 800 aaKnown RBP21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 ZMYM4Q5VZL5 1548 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 MICU3Q86XE3 530 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 FAM43AQ8N2R8 423 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 TMX3Q96JJ7 454 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 BLMP54132 1417 aaPredicted RBP21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 PLEKHG1Q9ULL1 1385 aa21.1■□□□□ 0.97
PTPDC1-202ENST00000375360 LETM1O95202 739 aaPredicted RBP21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 TXLNAP40222 546 aa21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 CDK5RAP3Q96JB5 506 aa21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 C8orf76Q96K31 380 aa21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 GRPEL1Q9HAV7 217 aa21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
PTPDC1-202ENST00000375360 IQCA1Q86XH1 822 aa21.08■□□□□ 0.97
PTPDC1-202ENST00000375360 UTP14AQ9BVJ6 771 aaKnown RBP21.08■□□□□ 0.97
PTPDC1-202ENST00000375360 KDM5CP41229 1560 aa21.08■□□□□ 0.97
PTPDC1-202ENST00000375360 HMGB1P09429 215 aaKnown RBP21.08■□□□□ 0.96
PTPDC1-202ENST00000375360 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.96
PTPDC1-202ENST00000375360 GJB2P29033 226 aa21.08■□□□□ 0.96
PTPDC1-202ENST00000375360 NMIQ13287 307 aaPredicted RBP21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 CRACR2BQ8N4Y2 399 aaPredicted RBP21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 ZNF594Q96JF6 807 aaPredicted RBP21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 CEP89Q96ST8 783 aa21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 NUP62CLQ9H1M0 184 aa21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 TTF1Q15361 905 aaPredicted RBP21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 ZNF444Q8N0Y2 327 aaPredicted RBP21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 HECW2Q9P2P5 1572 aa21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 JAG2Q9Y219 1238 aa21.07■□□□□ 0.96
PTPDC1-202ENST00000375360 CCDC24Q8N4L8 307 aa21.06■□□□□ 0.96
PTPDC1-202ENST00000375360 METTL22Q9BUU2 404 aaPredicted RBP21.06■□□□□ 0.96
PTPDC1-202ENST00000375360 ZHX3Q9H4I2 956 aa21.06■□□□□ 0.96
PTPDC1-202ENST00000375360 RTCBQ9Y3I0 505 aaKnown RBP21.06■□□□□ 0.96
PTPDC1-202ENST00000375360 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
PTPDC1-202ENST00000375360 RNF123Q5XPI4 1314 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 TMOD2Q9NZR1 351 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 GIGYF1O75420 1035 aaPredicted RBP21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 CHST3Q7LGC8 479 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 CTCFLQ8NI51 663 aaPredicted RBP21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 NDUFB9Q9Y6M9 179 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 GNPATO15228 680 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 SSBP05455 408 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 CYP7A1P22680 504 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
PTPDC1-202ENST00000375360 ABCC3O15438 1527 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 MYOM2P54296 1465 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 UQCRFS1P1P0C7P4 283 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 MCMDC2Q4G0Z9 681 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 TMEM67Q5HYA8 995 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 SUCLG2Q96I99 432 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 NOL7Q9UMY1 257 aaKnown RBP21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 NSFL1CQ9UNZ2 370 aaKnown RBP21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 GOLGA8AA7E2F4 631 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 STX6O43752 255 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 HOXB7P09629 217 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 ARHGEF25Q86VW2 580 aa21.04■□□□□ 0.96
PTPDC1-202ENST00000375360 F8W031 263 aaPredicted RBP21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 CHMLP26374 656 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 TPTE2Q6XPS3 522 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 KRT18P05783 430 aaKnown RBP21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 CPA1P15085 419 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 DBNDD2Q9BQY9 259 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 FAM13BQ9NYF5 915 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 INSRP06213 1382 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 TTLL5Q6EMB2 1281 aa21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 KDM5AP29375 1690 aaKnown RBP21.03■□□□□ 0.96
PTPDC1-202ENST00000375360 RNF41Q9H4P4 317 aaPredicted RBP21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 ORC3Q9UBD5 711 aaPredicted RBP21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 PHKG2P15735 406 aa21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 MFSD6Q6ZSS7 791 aa21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 USP44Q9H0E7 712 aa21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 ARHGEF10O15013 1369 aa21.02■□□□□ 0.96
PTPDC1-202ENST00000375360 WASF1Q92558 559 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC196A0A1B0GTZ2 297 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 TSPY2A6NKD2 308 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 BAG4O95429 457 aaKnown RBP21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 SERPINC1P01008 464 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 NCOA7Q8NI08 942 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 KDM2BQ8NHM5 1336 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 GCKRQ14397 625 aa21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 HMGN5P82970 282 aaKnown RBP21.01■□□□□ 0.95
PTPDC1-202ENST00000375360 KIAA0232Q92628 1395 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 DTNBO60941 627 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 MIGA1Q8NAN2 632 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 SCAND2PQ9GZW5 306 aaPredicted RBP21■□□□□ 0.95
PTPDC1-202ENST00000375360 ZNF287Q9HBT7 754 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC39Q9UFE4 941 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 PLXNC1O60486 1568 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 CKAP2LQ8IYA6 745 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 STX8Q9UNK0 236 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms