RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-203ENST00000374429 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
CXCL12-203ENST00000374429 SLC4A8Q2Y0W8 1093 aa12.98□□□□□ -0.33
CXCL12-203ENST00000374429 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
CXCL12-203ENST00000374429 L1TD1Q5T7N2 865 aaKnown RBP12.98□□□□□ -0.33
CXCL12-203ENST00000374429 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
CXCL12-203ENST00000374429 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
CXCL12-203ENST00000374429 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
CXCL12-203ENST00000374429 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 LARGE1O95461 756 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 SNX21Q969T3 373 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
CXCL12-203ENST00000374429 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
CXCL12-203ENST00000374429 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-203ENST00000374429 NUCB2P80303 420 aa12.96□□□□□ -0.33
CXCL12-203ENST00000374429 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-203ENST00000374429 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
CXCL12-203ENST00000374429 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.33
CXCL12-203ENST00000374429 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-203ENST00000374429 CAMK4Q16566 473 aa12.96□□□□□ -0.33
CXCL12-203ENST00000374429 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
CXCL12-203ENST00000374429 IL2RBP14784 551 aa12.96□□□□□ -0.34
CXCL12-203ENST00000374429 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.34
CXCL12-203ENST00000374429 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.34
CXCL12-203ENST00000374429 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.34
CXCL12-203ENST00000374429 JAG2Q9Y219 1238 aa12.96□□□□□ -0.34
CXCL12-203ENST00000374429 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.34
CXCL12-203ENST00000374429 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 PDIA6Q15084 440 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
CXCL12-203ENST00000374429 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-203ENST00000374429 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-203ENST00000374429 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
CXCL12-203ENST00000374429 C3P01024 1663 aa12.94□□□□□ -0.34
CXCL12-203ENST00000374429 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
CXCL12-203ENST00000374429 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
CXCL12-203ENST00000374429 SGSM2O43147 1006 aa12.94□□□□□ -0.34
CXCL12-203ENST00000374429 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-203ENST00000374429 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-203ENST00000374429 IDH1O75874 414 aaKnown RBP12.94□□□□□ -0.34
CXCL12-203ENST00000374429 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
CXCL12-203ENST00000374429 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
CXCL12-203ENST00000374429 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
CXCL12-203ENST00000374429 CCDC144CPQ8IYA2 1237 aa12.93□□□□□ -0.34
CXCL12-203ENST00000374429 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
CXCL12-203ENST00000374429 GJB2P29033 226 aa12.93□□□□□ -0.34
CXCL12-203ENST00000374429 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 TTLL5Q6EMB2 1281 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-203ENST00000374429 TAF5LO75529 589 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 RXRAP19793 462 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 BLOC1S2Q6QNY1 142 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 NRKQ7Z2Y5 1582 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
CXCL12-203ENST00000374429 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
CXCL12-203ENST00000374429 LARP1BQ659C4 914 aaKnown RBP12.92□□□□□ -0.34
CXCL12-203ENST00000374429 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 ADORA1P30542 326 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
CXCL12-203ENST00000374429 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
CXCL12-203ENST00000374429 HLFQ16534 295 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
CXCL12-203ENST00000374429 H3BQV1 296 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 CREB3L3Q68CJ9 461 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
CXCL12-203ENST00000374429 EXOC5O00471 708 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 POLA2Q14181 598 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 PIGBQ92521 554 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 BRF1Q92994 677 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 USP48Q86UV5 1035 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
CXCL12-203ENST00000374429 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
CXCL12-203ENST00000374429 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-203ENST00000374429 HDAC5Q9UQL6 1122 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 JAK2O60674 1132 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms