RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SLC10A5Q5PT55 438 aa23.43■■□□□ 1.34
TRAPPC3-202ENST00000373162 SOGA3Q5TF21 947 aa23.43■■□□□ 1.34
TRAPPC3-202ENST00000373162 GLTPD2A6NH11 291 aa23.42■■□□□ 1.34
TRAPPC3-202ENST00000373162 TOMM70O94826 608 aa23.42■■□□□ 1.34
TRAPPC3-202ENST00000373162 NLRP10Q86W26 655 aa23.42■■□□□ 1.34
TRAPPC3-202ENST00000373162 TAOK3Q9H2K8 898 aa23.42■■□□□ 1.34
TRAPPC3-202ENST00000373162 DDX60Q8IY21 1712 aaKnown RBP23.42■■□□□ 1.34
TRAPPC3-202ENST00000373162 CALD1Q05682 793 aaKnown RBP23.41■■□□□ 1.34
TRAPPC3-202ENST00000373162 TCIRG1Q13488 830 aa23.41■■□□□ 1.34
TRAPPC3-202ENST00000373162 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
TRAPPC3-202ENST00000373162 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
TRAPPC3-202ENST00000373162 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC3-202ENST00000373162 PPP1R42Q7Z4L9 355 aa23.4■■□□□ 1.34
TRAPPC3-202ENST00000373162 POTECB2RU33 542 aa23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 GTF2E1P29083 439 aaPredicted RBP23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 ALDH1B1P30837 517 aa23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 AIMP1Q12904 312 aaKnown RBP23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 HSP90AB3PQ58FF7 597 aa23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 C8orf58Q8NAV2 365 aa23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.33
TRAPPC3-202ENST00000373162 FKBP4Q02790 459 aaKnown RBP eCLIP23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 SLC51AQ86UW1 340 aa23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 RBM46Q8TBY0 533 aaKnown RBP23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 CRAMP1Q96RY5 1269 aa23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 ISCA1Q9BUE6 129 aa23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 COL4A5P29400 1685 aa23.38■■□□□ 1.33
TRAPPC3-202ENST00000373162 WWC1Q8IX03 1113 aa23.37■■□□□ 1.33
TRAPPC3-202ENST00000373162 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
TRAPPC3-202ENST00000373162 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
TRAPPC3-202ENST00000373162 ANP32CO43423 234 aa23.36■■□□□ 1.33
TRAPPC3-202ENST00000373162 SYNE4Q8N205 404 aa23.36■■□□□ 1.33
TRAPPC3-202ENST00000373162 RRAGCQ9HB90 399 aa23.36■■□□□ 1.33
TRAPPC3-202ENST00000373162 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
TRAPPC3-202ENST00000373162 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
TRAPPC3-202ENST00000373162 IL16Q14005 1332 aa23.34■■□□□ 1.33
TRAPPC3-202ENST00000373162 IFFO2Q5TF58 517 aa23.34■■□□□ 1.33
TRAPPC3-202ENST00000373162 RTKN2Q8IZC4 609 aa23.34■■□□□ 1.33
TRAPPC3-202ENST00000373162 TSPYL6Q8N831 410 aa23.34■■□□□ 1.33
TRAPPC3-202ENST00000373162 PSMD1Q99460 953 aa23.34■■□□□ 1.33
TRAPPC3-202ENST00000373162 LRRC37AA6NMS7 1700 aa23.33■■□□□ 1.33
TRAPPC3-202ENST00000373162 COL4A1P02462 1669 aa23.33■■□□□ 1.33
TRAPPC3-202ENST00000373162 TRIM28Q13263 835 aaKnown RBP23.33■■□□□ 1.33
TRAPPC3-202ENST00000373162 CC2D2BQ6DHV5 1058 aa23.32■■□□□ 1.32
TRAPPC3-202ENST00000373162 RPGRQ92834 1020 aaKnown RBP23.32■■□□□ 1.32
TRAPPC3-202ENST00000373162 PHAXQ9H814 394 aaKnown RBP23.32■■□□□ 1.32
TRAPPC3-202ENST00000373162 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 TSR2Q969E8 191 aaKnown RBP23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 ZNF277Q9NRM2 450 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 ABCC4O15439 1325 aa23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 SH3TC1Q8TE82 1336 aa23.31■■□□□ 1.32
TRAPPC3-202ENST00000373162 TAF1P21675 1872 aa23.3■■□□□ 1.32
TRAPPC3-202ENST00000373162 VEGFAP15692 232 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC3-202ENST00000373162 FSTL1Q12841 308 aa23.3■■□□□ 1.32
TRAPPC3-202ENST00000373162 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
TRAPPC3-202ENST00000373162 HCLS1P14317 486 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC3-202ENST00000373162 DUOX1Q9NRD9 1551 aa23.29■■□□□ 1.32
TRAPPC3-202ENST00000373162 TRMT112Q9UI30 125 aaKnown RBP23.29■■□□□ 1.32
TRAPPC3-202ENST00000373162 SCN4AP35499 1836 aa23.29■■□□□ 1.32
TRAPPC3-202ENST00000373162 PPEF1O14829 653 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC3-202ENST00000373162 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
TRAPPC3-202ENST00000373162 L3MBTL3Q96JM7 780 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC3-202ENST00000373162 ZNF541Q9H0D2 1346 aa23.28■■□□□ 1.32
TRAPPC3-202ENST00000373162 ADAMTSL1Q8N6G6 1762 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 ATP5J2-PTCD1G3V325 749 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 FZD9O00144 591 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 DDNO94850 711 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 DPY19L2Q6NUT2 758 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 DNAJC5GQ8N7S2 189 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 LTBP1Q14766 1721 aa23.27■■□□□ 1.32
TRAPPC3-202ENST00000373162 ATP6V0A2Q9Y487 856 aa23.26■■□□□ 1.31
TRAPPC3-202ENST00000373162 SF3B3Q15393 1217 aaKnown RBP23.25■■□□□ 1.31
TRAPPC3-202ENST00000373162 CCDC30Q5VVM6 783 aa23.25■■□□□ 1.31
TRAPPC3-202ENST00000373162 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
TRAPPC3-202ENST00000373162 APLP1P51693 650 aa23.24■■□□□ 1.31
TRAPPC3-202ENST00000373162 WDR63Q8IWG1 891 aa23.24■■□□□ 1.31
TRAPPC3-202ENST00000373162 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-202ENST00000373162 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
TRAPPC3-202ENST00000373162 RTFDC1Q9BY42 306 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-202ENST00000373162 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
TRAPPC3-202ENST00000373162 SMC1BQ8NDV3 1235 aa23.23■■□□□ 1.31
TRAPPC3-202ENST00000373162 PCNTO95613 3336 aa23.23■■□□□ 1.31
TRAPPC3-202ENST00000373162 GRAPQ13588 217 aa23.22■■□□□ 1.31
TRAPPC3-202ENST00000373162 GRAPLQ8TC17 118 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC3-202ENST00000373162 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
TRAPPC3-202ENST00000373162 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC3-202ENST00000373162 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 BBOX1O75936 387 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 SP8Q8IXZ3 490 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 METTL22Q9BUU2 404 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
TRAPPC3-202ENST00000373162 ZBTB38Q8NAP3 1195 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC3-202ENST00000373162 CCDC191Q8NCU4 936 aa23.2■■□□□ 1.3
TRAPPC3-202ENST00000373162 G2E3Q7L622 706 aa23.19■■□□□ 1.3
TRAPPC3-202ENST00000373162 MYD88Q99836 296 aa23.19■■□□□ 1.3
TRAPPC3-202ENST00000373162 IRS4O14654 1257 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms