RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 SH2B1Q9NRF2 756 aaPredicted RBP20■□□□□ 0.79
PCIF1-201ENST00000372409 NEXNQ0ZGT2 675 aa20■□□□□ 0.79
PCIF1-201ENST00000372409 TM6SF1Q9BZW5 370 aa20■□□□□ 0.79
PCIF1-201ENST00000372409 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
PCIF1-201ENST00000372409 HIP1O00291 1037 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 KRT28Q7Z3Y7 464 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 PDIA6Q15084 440 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 TCEANC2Q96MN5 208 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 MTMR6Q9Y217 621 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 OVOS2A0A0G2JMS6 1433 aa19.99■□□□□ 0.79
PCIF1-201ENST00000372409 A0A0D9SFI3 127 aa19.98■□□□□ 0.79
PCIF1-201ENST00000372409 JARID2Q92833 1246 aaPredicted RBP19.98■□□□□ 0.79
PCIF1-201ENST00000372409 MYD88Q99836 296 aa19.98■□□□□ 0.79
PCIF1-201ENST00000372409 NLRP2Q9NX02 1062 aa19.98■□□□□ 0.79
PCIF1-201ENST00000372409 HCLS1P14317 486 aaPredicted RBP19.98■□□□□ 0.79
PCIF1-201ENST00000372409 LARP1Q6PKG0 1096 aaKnown RBP19.98■□□□□ 0.79
PCIF1-201ENST00000372409 XAGE3Q8WTP9 111 aa19.98■□□□□ 0.79
PCIF1-201ENST00000372409 USP25Q9UHP3 1055 aa19.98■□□□□ 0.79
PCIF1-201ENST00000372409 MAP4K1Q92918 833 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 TPCN1Q9ULQ1 816 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 SLC27A2O14975 620 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
PCIF1-201ENST00000372409 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 FAM184AQ8NB25 1140 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 NFATC2IPQ8NCF5 419 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 UTYO14607 1347 aa19.97■□□□□ 0.79
PCIF1-201ENST00000372409 MCM5P33992 734 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 ST3GAL1Q11201 340 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 COL9A3Q14050 684 aaPredicted RBP19.96■□□□□ 0.79
PCIF1-201ENST00000372409 KCNB2Q92953 911 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 NEURL1BA8MQ27 555 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 RRP9O43818 475 aaKnown RBP19.96■□□□□ 0.79
PCIF1-201ENST00000372409 CSPP1Q1MSJ5 1256 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 LETM1O95202 739 aaPredicted RBP19.96■□□□□ 0.79
PCIF1-201ENST00000372409 PSMA5P28066 241 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 PLCB2Q00722 1185 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 GIMAP6Q6P9H5 292 aa19.96■□□□□ 0.79
PCIF1-201ENST00000372409 EDC3Q96F86 508 aaKnown RBP19.96■□□□□ 0.79
PCIF1-201ENST00000372409 SLIT3O75094 1523 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 EPHA10Q5JZY3 1008 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 LARP1BQ659C4 914 aaKnown RBP19.95■□□□□ 0.78
PCIF1-201ENST00000372409 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 ERBB3P21860 1342 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 GCKRQ14397 625 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
PCIF1-201ENST00000372409 RGPD5Q99666 1765 aa19.94■□□□□ 0.78
PCIF1-201ENST00000372409 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
PCIF1-201ENST00000372409 TAF6LQ9Y6J9 622 aa19.94■□□□□ 0.78
PCIF1-201ENST00000372409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.94■□□□□ 0.78
PCIF1-201ENST00000372409 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
PCIF1-201ENST00000372409 UBE2Q2Q8WVN8 375 aa19.93■□□□□ 0.78
PCIF1-201ENST00000372409 STK3Q13188 491 aa19.93■□□□□ 0.78
PCIF1-201ENST00000372409 ZNF589Q86UQ0 364 aaPredicted RBP19.93■□□□□ 0.78
PCIF1-201ENST00000372409 NPHP3Q7Z494 1330 aa19.93■□□□□ 0.78
PCIF1-201ENST00000372409 ADCY5O95622 1261 aa19.92■□□□□ 0.78
PCIF1-201ENST00000372409 TATP17735 454 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 CSB-PGBD3P0DP91 1061 aa19.92■□□□□ 0.78
PCIF1-201ENST00000372409 ZNF830Q96NB3 372 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 METTL22Q9BUU2 404 aaPredicted RBP19.92■□□□□ 0.78
PCIF1-201ENST00000372409 NDUFB9Q9Y6M9 179 aa19.92■□□□□ 0.78
PCIF1-201ENST00000372409 FAM173BQ6P4H8 233 aa19.91■□□□□ 0.78
PCIF1-201ENST00000372409 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
PCIF1-201ENST00000372409 CDC37L1Q7L3B6 337 aa19.91■□□□□ 0.78
PCIF1-201ENST00000372409 USP16Q9Y5T5 823 aa19.91■□□□□ 0.78
PCIF1-201ENST00000372409 PHKG2P15735 406 aa19.9■□□□□ 0.78
PCIF1-201ENST00000372409 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
PCIF1-201ENST00000372409 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
PCIF1-201ENST00000372409 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
PCIF1-201ENST00000372409 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
PCIF1-201ENST00000372409 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
PCIF1-201ENST00000372409 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
PCIF1-201ENST00000372409 ANKRD1Q15327 319 aa19.89■□□□□ 0.78
PCIF1-201ENST00000372409 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.78
PCIF1-201ENST00000372409 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
PCIF1-201ENST00000372409 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
PCIF1-201ENST00000372409 KRT85P78386 507 aa19.89■□□□□ 0.77
PCIF1-201ENST00000372409 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
PCIF1-201ENST00000372409 TFCP2Q12800 502 aa19.89■□□□□ 0.77
PCIF1-201ENST00000372409 DNAJC2Q99543 621 aaKnown RBP19.89■□□□□ 0.77
PCIF1-201ENST00000372409 C5P01031 1676 aa19.89■□□□□ 0.77
PCIF1-201ENST00000372409 DDX17Q92841 729 aaKnown RBP19.89■□□□□ 0.77
PCIF1-201ENST00000372409 MED23Q9ULK4 1368 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 UQCRHLA0A096LP55 91 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 UQCRHP07919 91 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 DNTTIP2Q5QJE6 756 aaKnown RBP19.88■□□□□ 0.77
PCIF1-201ENST00000372409 DBNLQ9UJU6 430 aaKnown RBP19.88■□□□□ 0.77
PCIF1-201ENST00000372409 PDCP20941 246 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 TERF1P54274 439 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 TTC6Q86TZ1 520 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 SNRKQ9NRH2 765 aa19.88■□□□□ 0.77
PCIF1-201ENST00000372409 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
PCIF1-201ENST00000372409 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms