RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 SETD1BQ9UPS6 1966 aaKnown RBP11.89□□□□□ -0.51
KDM4A-201ENST00000372396 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
KDM4A-201ENST00000372396 FAM177BA6PVY3 158 aa11.89□□□□□ -0.51
KDM4A-201ENST00000372396 PHF14O94880 888 aa11.89□□□□□ -0.51
KDM4A-201ENST00000372396 CPLX2Q6PUV4 134 aaKnown RBP11.89□□□□□ -0.51
KDM4A-201ENST00000372396 OGFRQ9NZT2 677 aa11.89□□□□□ -0.51
KDM4A-201ENST00000372396 UBAP1LF5GYI3 381 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 KIF20BQ96Q89 1820 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 DDB1Q16531 1140 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
KDM4A-201ENST00000372396 ZSCAN25Q6NSZ9 544 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 MPHOSPH8Q99549 860 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 H3BQV1 296 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
KDM4A-201ENST00000372396 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 EVI5LQ96CN4 794 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
KDM4A-201ENST00000372396 KIF13AQ9H1H9 1805 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 G3V3G9 751 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 SDSP20132 328 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 ANKRD1Q15327 319 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
KDM4A-201ENST00000372396 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
KDM4A-201ENST00000372396 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 DEF6Q9H4E7 631 aa11.86□□□□□ -0.51
KDM4A-201ENST00000372396 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
KDM4A-201ENST00000372396 KRT32Q14532 448 aa11.86□□□□□ -0.51
KDM4A-201ENST00000372396 BRINP3Q76B58 766 aa11.86□□□□□ -0.51
KDM4A-201ENST00000372396 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.512e-7■■■□□ 15.7
KDM4A-201ENST00000372396 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 EFCC1Q9HA90 598 aa11.86□□□□□ -0.51
KDM4A-201ENST00000372396 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
KDM4A-201ENST00000372396 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 COL3A1P02461 1466 aaPredicted RBP11.85□□□□□ -0.51
KDM4A-201ENST00000372396 IGHMBP2P38935 993 aaKnown RBP11.85□□□□□ -0.51
KDM4A-201ENST00000372396 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
KDM4A-201ENST00000372396 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 CARD10Q9BWT7 1032 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 ZNF335Q9H4Z2 1342 aaPredicted RBP11.85□□□□□ -0.51
KDM4A-201ENST00000372396 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 AMOTL1Q8IY63 956 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
KDM4A-201ENST00000372396 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 BOLA2Q9H3K6 86 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 KDRP35968 1356 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
KDM4A-201ENST00000372396 RBM25P49756 843 aaKnown RBP11.84□□□□□ -0.51
KDM4A-201ENST00000372396 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
KDM4A-201ENST00000372396 AOX1Q06278 1338 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 GPS2Q13227 327 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 TSC1Q92574 1164 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 CPLX1O14810 134 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 TNNT1P13805 278 aa11.84□□□□□ -0.51
KDM4A-201ENST00000372396 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
KDM4A-201ENST00000372396 C3P01024 1663 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 KCNQ3O43525 872 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 PDCP20941 246 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 SLC20A2Q08357 652 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
KDM4A-201ENST00000372396 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
KDM4A-201ENST00000372396 BLOC1S2Q6QNY1 142 aa11.83□□□□□ -0.52
KDM4A-201ENST00000372396 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
KDM4A-201ENST00000372396 RNF214Q8ND24 703 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 GPTP24298 496 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
KDM4A-201ENST00000372396 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
KDM4A-201ENST00000372396 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 IL15P40933 162 aaPredicted RBP11.82□□□□□ -0.52
KDM4A-201ENST00000372396 LMBR1LQ6UX01 489 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms