RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-202ENST00000371820 GNAI1P63096 354 aa13.27□□□□□ -0.29
COL5A1-202ENST00000371820 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
COL5A1-202ENST00000371820 NPR1P16066 1061 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 NUP98P52948 1817 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 HLFQ16534 295 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 TTLL7Q6ZT98 887 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 C7orf43Q8WVR3 580 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
COL5A1-202ENST00000371820 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
COL5A1-202ENST00000371820 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
COL5A1-202ENST00000371820 CCDC93Q567U6 631 aa13.25□□□□□ -0.29
COL5A1-202ENST00000371820 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
COL5A1-202ENST00000371820 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
COL5A1-202ENST00000371820 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
COL5A1-202ENST00000371820 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
COL5A1-202ENST00000371820 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL5A1-202ENST00000371820 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
COL5A1-202ENST00000371820 MS4A1P11836 297 aa13.24□□□□□ -0.29
COL5A1-202ENST00000371820 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
COL5A1-202ENST00000371820 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
COL5A1-202ENST00000371820 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 ABCC12Q96J65 1359 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 DDNO94850 711 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 PDIA6Q15084 440 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
COL5A1-202ENST00000371820 SCN4AP35499 1836 aa13.23□□□□□ -0.29
COL5A1-202ENST00000371820 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 GPTP24298 496 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
COL5A1-202ENST00000371820 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
COL5A1-202ENST00000371820 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
COL5A1-202ENST00000371820 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
COL5A1-202ENST00000371820 PROSER3Q2NL68 480 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
COL5A1-202ENST00000371820 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 ANXA1P04083 346 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
COL5A1-202ENST00000371820 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-202ENST00000371820 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
COL5A1-202ENST00000371820 PCNTO95613 3336 aa13.19□□□□□ -0.3
COL5A1-202ENST00000371820 NTSR2O95665 410 aa13.19□□□□□ -0.3
COL5A1-202ENST00000371820 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-202ENST00000371820 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
COL5A1-202ENST00000371820 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
COL5A1-202ENST00000371820 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
COL5A1-202ENST00000371820 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-202ENST00000371820 IL16Q14005 1332 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
COL5A1-202ENST00000371820 TCIRG1Q13488 830 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 NLRP3Q96P20 1036 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
COL5A1-202ENST00000371820 PASKQ96RG2 1323 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 FZD9O00144 591 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
COL5A1-202ENST00000371820 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
COL5A1-202ENST00000371820 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
COL5A1-202ENST00000371820 PSMD1Q99460 953 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-202ENST00000371820 COL4A5P29400 1685 aa13.17□□□□□ -0.3
COL5A1-202ENST00000371820 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
COL5A1-202ENST00000371820 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-202ENST00000371820 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
COL5A1-202ENST00000371820 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
COL5A1-202ENST00000371820 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
COL5A1-202ENST00000371820 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
COL5A1-202ENST00000371820 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms