RNA–Protein interactions for RNA: ENST00000369705.3

ME1-201, Transcript of malic enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME1, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME1-201ENST00000369705 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
ME1-201ENST00000369705 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
ME1-201ENST00000369705 BICC1Q9H694 974 aaKnown RBP12.92□□□□□ -0.34
ME1-201ENST00000369705 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
ME1-201ENST00000369705 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
ME1-201ENST00000369705 SLIT2O94813 1529 aa12.92□□□□□ -0.34
ME1-201ENST00000369705 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 CERS3Q8IU89 383 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
ME1-201ENST00000369705 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
ME1-201ENST00000369705 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 SIL1Q9H173 461 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 BCL9O00512 1426 aa12.91□□□□□ -0.34
ME1-201ENST00000369705 KCNQ4P56696 695 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 C5P01031 1676 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 PLCH1Q4KWH8 1693 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 AFF2P51816 1311 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
ME1-201ENST00000369705 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
ME1-201ENST00000369705 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
ME1-201ENST00000369705 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
ME1-201ENST00000369705 GPTP24298 496 aa12.89□□□□□ -0.35
ME1-201ENST00000369705 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
ME1-201ENST00000369705 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
ME1-201ENST00000369705 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
ME1-201ENST00000369705 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
ME1-201ENST00000369705 LOC102724428A0A0B4J2F2 783 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 SIK1P57059 783 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 RHPN1Q8TCX5 695 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 EP400Q96L91 3159 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 LRP6O75581 1613 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 POLA2Q14181 598 aa12.87□□□□□ -0.35
ME1-201ENST00000369705 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
ME1-201ENST00000369705 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
ME1-201ENST00000369705 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
ME1-201ENST00000369705 CDK11BP21127 795 aaKnown RBP12.86□□□□□ -0.35
ME1-201ENST00000369705 PDE1AP54750 535 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 DYNC1I1O14576 645 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 RILPL2Q969X0 211 aa12.86□□□□□ -0.35
ME1-201ENST00000369705 QTRT2Q9H974 415 aaKnown RBP12.86□□□□□ -0.35
ME1-201ENST00000369705 MX1P20591 662 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 TERF1P54274 439 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 HLFQ16534 295 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 DNTTIP2Q5QJE6 756 aaKnown RBP12.85□□□□□ -0.35
ME1-201ENST00000369705 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
ME1-201ENST00000369705 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
ME1-201ENST00000369705 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
ME1-201ENST00000369705 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
ME1-201ENST00000369705 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 SDSP20132 328 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 ITPK1Q13572 414 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
ME1-201ENST00000369705 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
ME1-201ENST00000369705 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
ME1-201ENST00000369705 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
ME1-201ENST00000369705 KIF20AO95235 890 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 UTYO14607 1347 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 DDX11L8A8MPP1 907 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 MTX1Q13505 466 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 NRAPQ86VF7 1730 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 SMIM5Q71RC9 77 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
ME1-201ENST00000369705 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
ME1-201ENST00000369705 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
ME1-201ENST00000369705 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms