RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
CCNC-203ENST00000369220 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
CCNC-203ENST00000369220 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 PTPRCP08575 1304 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 GTF2E1P29083 439 aaPredicted RBP13.13□□□□□ -0.31
CCNC-203ENST00000369220 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
CCNC-203ENST00000369220 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
CCNC-203ENST00000369220 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
CCNC-203ENST00000369220 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
CCNC-203ENST00000369220 TRIM27P14373 513 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
CCNC-203ENST00000369220 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 ST5P78524 1137 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
CCNC-203ENST00000369220 CWC25Q9NXE8 425 aaPredicted RBP13.12□□□□□ -0.31
CCNC-203ENST00000369220 N4BP2Q86UW6 1770 aaPredicted RBP13.11□□□□□ -0.31
CCNC-203ENST00000369220 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 DPEP1P16444 411 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 KCNA3P22001 575 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
CCNC-203ENST00000369220 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
CCNC-203ENST00000369220 PLIN1O60240 522 aa13.1□□□□□ -0.31
CCNC-203ENST00000369220 GCKRQ14397 625 aa13.1□□□□□ -0.31
CCNC-203ENST00000369220 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
CCNC-203ENST00000369220 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
CCNC-203ENST00000369220 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
CCNC-203ENST00000369220 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
CCNC-203ENST00000369220 RLBP1P12271 317 aa13.09□□□□□ -0.31
CCNC-203ENST00000369220 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
CCNC-203ENST00000369220 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
CCNC-203ENST00000369220 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CCNC-203ENST00000369220 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
CCNC-203ENST00000369220 SRGNP10124 158 aa13.08□□□□□ -0.32
CCNC-203ENST00000369220 TGFB2P61812 414 aa13.08□□□□□ -0.32
CCNC-203ENST00000369220 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
CCNC-203ENST00000369220 ABCC4O15439 1325 aa13.08□□□□□ -0.32
CCNC-203ENST00000369220 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
CCNC-203ENST00000369220 CASP7P55210 303 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
CCNC-203ENST00000369220 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
CCNC-203ENST00000369220 DDX60Q8IY21 1712 aaKnown RBP13.07□□□□□ -0.32
CCNC-203ENST00000369220 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
CCNC-203ENST00000369220 PDE6BP35913 854 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 CRY2Q49AN0 593 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
CCNC-203ENST00000369220 COL4A1P02462 1669 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 H0YIN7 160 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 H7C1W4 665 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 GRM8O00222 908 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■□□□□ 9
CCNC-203ENST00000369220 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
CCNC-203ENST00000369220 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
CCNC-203ENST00000369220 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
CCNC-203ENST00000369220 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCNC-203ENST00000369220 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
CCNC-203ENST00000369220 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
CCNC-203ENST00000369220 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
CCNC-203ENST00000369220 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
CCNC-203ENST00000369220 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
CCNC-203ENST00000369220 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 KAZALD1Q96I82 304 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 LAMB2P55268 1798 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 TAF1P21675 1872 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
CCNC-203ENST00000369220 MEIS3Q99687 375 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 PIM2Q9P1W9 311 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 DLEC1Q9Y238 1755 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
CCNC-203ENST00000369220 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 MASTLQ96GX5 879 aa13.03□□□□□ -0.32
CCNC-203ENST00000369220 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
CCNC-203ENST00000369220 CTSWP56202 376 aa13.03□□□□□ -0.32
CCNC-203ENST00000369220 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
CCNC-203ENST00000369220 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms