RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TRIM28Q13263 835 aaKnown RBP23.73■■□□□ 1.39
CHTOP-202ENST00000368687 NLRP10Q86W26 655 aa23.73■■□□□ 1.39
CHTOP-202ENST00000368687 ZNF622Q969S3 477 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHTOP-202ENST00000368687 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
CHTOP-202ENST00000368687 SLC4A2P04920 1241 aa23.72■■□□□ 1.39
CHTOP-202ENST00000368687 CCDC24Q8N4L8 307 aa23.72■■□□□ 1.39
CHTOP-202ENST00000368687 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
CHTOP-202ENST00000368687 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
CHTOP-202ENST00000368687 NUTM1Q86Y26 1132 aa23.71■■□□□ 1.39
CHTOP-202ENST00000368687 ZNF428Q96B54 188 aa23.71■■□□□ 1.39
CHTOP-202ENST00000368687 ISCA1Q9BUE6 129 aa23.71■■□□□ 1.39
CHTOP-202ENST00000368687 ABCC12Q96J65 1359 aa23.7■■□□□ 1.38
CHTOP-202ENST00000368687 SH3TC1Q8TE82 1336 aa23.7■■□□□ 1.38
CHTOP-202ENST00000368687 SLFN5Q08AF3 891 aa23.7■■□□□ 1.38
CHTOP-202ENST00000368687 CRY2Q49AN0 593 aa23.7■■□□□ 1.38
CHTOP-202ENST00000368687 ERFEQ4G0M1 354 aa23.7■■□□□ 1.38
CHTOP-202ENST00000368687 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
CHTOP-202ENST00000368687 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
CHTOP-202ENST00000368687 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
CHTOP-202ENST00000368687 ARHGAP27Q6ZUM4 889 aa23.69■■□□□ 1.38
CHTOP-202ENST00000368687 TRMT112Q9UI30 125 aaKnown RBP23.69■■□□□ 1.38
CHTOP-202ENST00000368687 TNRC6CQ9HCJ0 1690 aaKnown RBP23.69■■□□□ 1.38
CHTOP-202ENST00000368687 NEXNQ0ZGT2 675 aa23.68■■□□□ 1.38
CHTOP-202ENST00000368687 NLRP3Q96P20 1036 aa23.68■■□□□ 1.38
CHTOP-202ENST00000368687 CACNA1SQ13698 1873 aa23.68■■□□□ 1.38
CHTOP-202ENST00000368687 FLIIQ13045 1269 aa23.67■■□□□ 1.38
CHTOP-202ENST00000368687 CCDC191Q8NCU4 936 aa23.67■■□□□ 1.38
CHTOP-202ENST00000368687 RPGRQ92834 1020 aaKnown RBP23.67■■□□□ 1.38
CHTOP-202ENST00000368687 METTL22Q9BUU2 404 aaPredicted RBP23.67■■□□□ 1.38
CHTOP-202ENST00000368687 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
CHTOP-202ENST00000368687 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
CHTOP-202ENST00000368687 PI4KAP2A4QPH2 592 aa23.65■■□□□ 1.38
CHTOP-202ENST00000368687 FKBP5Q13451 457 aaPredicted RBP23.65■■□□□ 1.38
CHTOP-202ENST00000368687 PI4KAP1Q8N8J0 262 aa23.65■■□□□ 1.38
CHTOP-202ENST00000368687 MAP3K2Q9Y2U5 619 aa23.65■■□□□ 1.38
CHTOP-202ENST00000368687 LAMB2P55268 1798 aa23.65■■□□□ 1.38
CHTOP-202ENST00000368687 SLX4Q8IY92 1834 aa23.64■■□□□ 1.38
CHTOP-202ENST00000368687 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.37
CHTOP-202ENST00000368687 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.37
CHTOP-202ENST00000368687 RBM17Q96I25 401 aaKnown RBP23.64■■□□□ 1.37
CHTOP-202ENST00000368687 MYD88Q99836 296 aa23.64■■□□□ 1.37
CHTOP-202ENST00000368687 CWC25Q9NXE8 425 aaPredicted RBP23.64■■□□□ 1.37
CHTOP-202ENST00000368687 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
CHTOP-202ENST00000368687 TRMT2AQ8IZ69 625 aaKnown RBP23.63■■□□□ 1.37
CHTOP-202ENST00000368687 ZBTB38Q8NAP3 1195 aaPredicted RBP23.63■■□□□ 1.37
CHTOP-202ENST00000368687 ZNF526Q8TF50 670 aaPredicted RBP23.63■■□□□ 1.37
CHTOP-202ENST00000368687 CRAMP1Q96RY5 1269 aa23.62■■□□□ 1.37
CHTOP-202ENST00000368687 FER1L6Q2WGJ9 1857 aa23.62■■□□□ 1.37
CHTOP-202ENST00000368687 GRIPAP1Q4V328 841 aa23.61■■□□□ 1.37
CHTOP-202ENST00000368687 DDX60Q8IY21 1712 aaKnown RBP23.61■■□□□ 1.37
CHTOP-202ENST00000368687 SBF1O95248 1867 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 C21orf2O43822 256 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 C1QTNF8P60827 252 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHTOP-202ENST00000368687 CC2D2BQ6DHV5 1058 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 G2E3Q7L622 706 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 DNAAF4Q8WXU2 420 aa23.6■■□□□ 1.37
CHTOP-202ENST00000368687 GPBP1L1Q9HC44 474 aaPredicted RBP23.6■■□□□ 1.37
CHTOP-202ENST00000368687 LTBP3Q9NS15 1303 aa23.59■■□□□ 1.37
CHTOP-202ENST00000368687 ZC3H4Q9UPT8 1303 aaKnown RBP23.59■■□□□ 1.37
CHTOP-202ENST00000368687 PCCAP05165 728 aaPredicted RBP23.59■■□□□ 1.37
CHTOP-202ENST00000368687 CCDC93Q567U6 631 aa23.59■■□□□ 1.37
CHTOP-202ENST00000368687 C9orf131Q5VYM1 1079 aa23.59■■□□□ 1.37
CHTOP-202ENST00000368687 CDCA7LQ96GN5 454 aa23.59■■□□□ 1.37
CHTOP-202ENST00000368687 ALDH1L2Q3SY69 923 aa23.58■■□□□ 1.37
CHTOP-202ENST00000368687 RTKN2Q8IZC4 609 aa23.58■■□□□ 1.37
CHTOP-202ENST00000368687 FAM89AQ96GI7 184 aa23.58■■□□□ 1.37
CHTOP-202ENST00000368687 TMX4Q9H1E5 349 aaPredicted RBP23.58■■□□□ 1.37
CHTOP-202ENST00000368687 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
CHTOP-202ENST00000368687 HCLS1P14317 486 aaPredicted RBP23.57■■□□□ 1.36
CHTOP-202ENST00000368687 LMNB1P20700 586 aa23.57■■□□□ 1.36
CHTOP-202ENST00000368687 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
CHTOP-202ENST00000368687 LINS1Q8NG48 757 aa23.57■■□□□ 1.36
CHTOP-202ENST00000368687 TAOK3Q9H2K8 898 aa23.57■■□□□ 1.36
CHTOP-202ENST00000368687 RASSF7Q02833 373 aa23.56■■□□□ 1.36
CHTOP-202ENST00000368687 TMC4Q7Z404 712 aa23.56■■□□□ 1.36
CHTOP-202ENST00000368687 C7orf43Q8WVR3 580 aa23.56■■□□□ 1.36
CHTOP-202ENST00000368687 PTPRCP08575 1304 aa23.56■■□□□ 1.36
CHTOP-202ENST00000368687 CDHR2Q9BYE9 1310 aa23.56■■□□□ 1.36
CHTOP-202ENST00000368687 NEURL1BA8MQ27 555 aa23.55■■□□□ 1.36
CHTOP-202ENST00000368687 IGKV5-2P06315 115 aa23.55■■□□□ 1.36
CHTOP-202ENST00000368687 SF3B3Q15393 1217 aaKnown RBP23.55■■□□□ 1.36
CHTOP-202ENST00000368687 BBOX1O75936 387 aa23.54■■□□□ 1.36
CHTOP-202ENST00000368687 RNF181Q9P0P0 153 aa23.54■■□□□ 1.36
CHTOP-202ENST00000368687 MYH3P11055 1940 aa23.54■■□□□ 1.36
CHTOP-202ENST00000368687 DICER1Q9UPY3 1922 aaKnown RBP23.54■■□□□ 1.36
CHTOP-202ENST00000368687 ZBED9Q6R2W3 1325 aa23.54■■□□□ 1.36
CHTOP-202ENST00000368687 NFKBIEO00221 500 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 PPEF1O14829 653 aaPredicted RBP23.53■■□□□ 1.36
CHTOP-202ENST00000368687 PRELPP51888 382 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 SYNE4Q8N205 404 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 ZNF219Q9P2Y4 722 aaPredicted RBP23.53■■□□□ 1.36
CHTOP-202ENST00000368687 CCDC88AQ3V6T2 1871 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 ABCC4O15439 1325 aa23.53■■□□□ 1.36
CHTOP-202ENST00000368687 PDE8AO60658 829 aa23.52■■□□□ 1.36
CHTOP-202ENST00000368687 GRAPQ13588 217 aa23.52■■□□□ 1.36
CHTOP-202ENST00000368687 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
CHTOP-202ENST00000368687 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
CHTOP-202ENST00000368687 GCKRQ14397 625 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms