RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ANKRD36CQ5JPF3 1778 aa21.03■□□□□ 0.96
CKS1B-202ENST00000368436 FZD9O00144 591 aa21.03■□□□□ 0.96
CKS1B-202ENST00000368436 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
CKS1B-202ENST00000368436 PARP10Q53GL7 1025 aa21.03■□□□□ 0.96
CKS1B-202ENST00000368436 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
CKS1B-202ENST00000368436 TAF1DQ9H5J8 278 aaPredicted RBP21.03■□□□□ 0.96
CKS1B-202ENST00000368436 PPP1R42Q7Z4L9 355 aa21.02■□□□□ 0.96
CKS1B-202ENST00000368436 CRAMP1Q96RY5 1269 aa21.02■□□□□ 0.96
CKS1B-202ENST00000368436 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
CKS1B-202ENST00000368436 GRIPAP1Q4V328 841 aa21.01■□□□□ 0.95
CKS1B-202ENST00000368436 SLC10A5Q5PT55 438 aa21.01■□□□□ 0.95
CKS1B-202ENST00000368436 LDHDQ86WU2 507 aa21.01■□□□□ 0.95
CKS1B-202ENST00000368436 RBM17Q96I25 401 aaKnown RBP21.01■□□□□ 0.95
CKS1B-202ENST00000368436 CHL1O00533 1208 aa21■□□□□ 0.95
CKS1B-202ENST00000368436 ANXA1P04083 346 aa21■□□□□ 0.95
CKS1B-202ENST00000368436 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
CKS1B-202ENST00000368436 C3orf67Q6ZVT6 689 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 CCDC146Q8IYE0 955 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 CREBZFQ9NS37 354 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 TRIM35Q9UPQ4 493 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 LAMB2P55268 1798 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 COL4A5P29400 1685 aa20.99■□□□□ 0.95
CKS1B-202ENST00000368436 NLRP3Q96P20 1036 aa20.98■□□□□ 0.95
CKS1B-202ENST00000368436 UTP14AQ9BVJ6 771 aaKnown RBP20.98■□□□□ 0.95
CKS1B-202ENST00000368436 HACL1Q9UJ83 578 aa20.98■□□□□ 0.95
CKS1B-202ENST00000368436 PASKQ96RG2 1323 aa20.98■□□□□ 0.95
CKS1B-202ENST00000368436 NEUROD2Q15784 382 aa20.97■□□□□ 0.95
CKS1B-202ENST00000368436 COPS6Q7L5N1 327 aa20.97■□□□□ 0.95
CKS1B-202ENST00000368436 GPC2Q8N158 579 aa20.97■□□□□ 0.95
CKS1B-202ENST00000368436 JDP2Q8WYK2 163 aa20.97■□□□□ 0.95
CKS1B-202ENST00000368436 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
CKS1B-202ENST00000368436 RNF123Q5XPI4 1314 aa20.97■□□□□ 0.95
CKS1B-202ENST00000368436 PPEF1O14829 653 aaPredicted RBP20.96■□□□□ 0.95
CKS1B-202ENST00000368436 EPHX2P34913 555 aa20.96■□□□□ 0.95
CKS1B-202ENST00000368436 HSP90AB3PQ58FF7 597 aa20.96■□□□□ 0.95
CKS1B-202ENST00000368436 XAGE3Q8WTP9 111 aa20.96■□□□□ 0.95
CKS1B-202ENST00000368436 ITGBL1O95965 494 aaPredicted RBP20.95■□□□□ 0.94
CKS1B-202ENST00000368436 WDR43Q15061 677 aaKnown RBP eCLIP20.95■□□□□ 0.94
CKS1B-202ENST00000368436 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
CKS1B-202ENST00000368436 NECTIN2Q92692 538 aa20.95■□□□□ 0.94
CKS1B-202ENST00000368436 COL13A1Q5TAT6 717 aaPredicted RBP20.94■□□□□ 0.94
CKS1B-202ENST00000368436 SLC51AQ86UW1 340 aa20.94■□□□□ 0.94
CKS1B-202ENST00000368436 PNMA8AQ86V59 439 aaPredicted RBP20.94■□□□□ 0.94
CKS1B-202ENST00000368436 NLRP10Q86W26 655 aa20.94■□□□□ 0.94
CKS1B-202ENST00000368436 ADAMTS8Q9UP79 889 aa20.94■□□□□ 0.94
CKS1B-202ENST00000368436 EIF6P56537 245 aaKnown RBP20.93■□□□□ 0.94
CKS1B-202ENST00000368436 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
CKS1B-202ENST00000368436 TCIRG1Q13488 830 aa20.93■□□□□ 0.94
CKS1B-202ENST00000368436 EAPPQ56P03 285 aaPredicted RBP20.93■□□□□ 0.94
CKS1B-202ENST00000368436 ATP6V0A2Q9Y487 856 aa20.93■□□□□ 0.94
CKS1B-202ENST00000368436 LTBP1Q14766 1721 aa20.92■□□□□ 0.94
CKS1B-202ENST00000368436 PCNTO95613 3336 aa20.92■□□□□ 0.94
CKS1B-202ENST00000368436 TCERG1O14776 1098 aaKnown RBP20.92■□□□□ 0.94
CKS1B-202ENST00000368436 HOXB7P09629 217 aa20.92■□□□□ 0.94
CKS1B-202ENST00000368436 HSPA1AP0DMV8 641 aaKnown RBP20.92■□□□□ 0.94
CKS1B-202ENST00000368436 HSPA1BP0DMV9 641 aaKnown RBP20.92■□□□□ 0.94
CKS1B-202ENST00000368436 LARGE2Q8N3Y3 721 aa20.92■□□□□ 0.94
CKS1B-202ENST00000368436 VPS33BQ9H267 617 aa20.92■□□□□ 0.94
CKS1B-202ENST00000368436 LAS1LQ9Y4W2 734 aaKnown RBP20.92■□□□□ 0.94
CKS1B-202ENST00000368436 ABCC4O15439 1325 aa20.91■□□□□ 0.94
CKS1B-202ENST00000368436 CHPF2Q9P2E5 772 aa20.91■□□□□ 0.94
CKS1B-202ENST00000368436 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
CKS1B-202ENST00000368436 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
CKS1B-202ENST00000368436 BBOX1O75936 387 aa20.9■□□□□ 0.94
CKS1B-202ENST00000368436 TMX4Q9H1E5 349 aaPredicted RBP20.9■□□□□ 0.94
CKS1B-202ENST00000368436 PRKRIP1Q9H875 184 aaPredicted RBP20.9■□□□□ 0.94
CKS1B-202ENST00000368436 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
CKS1B-202ENST00000368436 TAF1P21675 1872 aa20.9■□□□□ 0.94
CKS1B-202ENST00000368436 CNTNAP1P78357 1384 aa20.89■□□□□ 0.93
CKS1B-202ENST00000368436 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
CKS1B-202ENST00000368436 HCLS1P14317 486 aaPredicted RBP20.89■□□□□ 0.93
CKS1B-202ENST00000368436 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
CKS1B-202ENST00000368436 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
CKS1B-202ENST00000368436 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
CKS1B-202ENST00000368436 TRMT112Q9UI30 125 aaKnown RBP20.89■□□□□ 0.93
CKS1B-202ENST00000368436 DDX60Q8IY21 1712 aaKnown RBP20.89■□□□□ 0.93
CKS1B-202ENST00000368436 TMEM88BA6NKF7 163 aa20.88■□□□□ 0.93
CKS1B-202ENST00000368436 HDGFL1Q5TGJ6 251 aa20.88■□□□□ 0.93
CKS1B-202ENST00000368436 NIM1KQ8IY84 436 aa20.88■□□□□ 0.93
CKS1B-202ENST00000368436 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
CKS1B-202ENST00000368436 PLBD2Q8NHP8 589 aa20.88■□□□□ 0.93
CKS1B-202ENST00000368436 PPIP5K2O43314 1243 aa20.87■□□□□ 0.93
CKS1B-202ENST00000368436 SCNN1DP51172 638 aa20.87■□□□□ 0.93
CKS1B-202ENST00000368436 MAP1SQ66K74 1059 aaPredicted RBP20.87■□□□□ 0.93
CKS1B-202ENST00000368436 SUPT20HQ8NEM7 779 aa20.87■□□□□ 0.93
CKS1B-202ENST00000368436 DBF4Q9UBU7 674 aaPredicted RBP20.87■□□□□ 0.93
CKS1B-202ENST00000368436 ZNF853P0CG23 659 aa20.86■□□□□ 0.93
CKS1B-202ENST00000368436 LMOD1P29536 600 aaPredicted RBP20.86■□□□□ 0.93
CKS1B-202ENST00000368436 AOC3Q16853 763 aa20.86■□□□□ 0.93
CKS1B-202ENST00000368436 ANKRD13DQ6ZTN6 518 aa20.86■□□□□ 0.93
CKS1B-202ENST00000368436 ISCA1Q9BUE6 129 aa20.86■□□□□ 0.93
CKS1B-202ENST00000368436 EPS15P42566 896 aa20.85■□□□□ 0.93
CKS1B-202ENST00000368436 GRAPQ13588 217 aa20.85■□□□□ 0.93
CKS1B-202ENST00000368436 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
CKS1B-202ENST00000368436 DDX46Q7L014 1031 aaKnown RBP20.85■□□□□ 0.93
CKS1B-202ENST00000368436 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
CKS1B-202ENST00000368436 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
CKS1B-202ENST00000368436 LRRC37AA6NMS7 1700 aa20.84■□□□□ 0.93
CKS1B-202ENST00000368436 DPP8Q6V1X1 898 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms