RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MARF1Q9Y4F3 1742 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 TMEM131LA2VDJ0 1609 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 COL22A1Q8NFW1 1626 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 TRAK2O60296 914 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 RGS19P49795 217 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 NR6A1Q15406 480 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 TRIM34Q9BYJ4 488 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 EVA1BQ9NVM1 165 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 COG6Q9Y2V7 657 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 FOXK2Q01167 660 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 ZNF592Q92610 1267 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 CWC22Q9HCG8 908 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 NMRK2Q9NPI5 230 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 MAP10Q9P2G4 905 aa4.93□□□□□ -1.62
ECHDC1-205ENST00000368295 PTPRUQ92729 1446 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 DHX57Q6P158 1386 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 H3BM21 787 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 TOMM70O94826 608 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 PTF1AQ7RTS3 328 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 CERS3Q8IU89 383 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 TBC1D2BQ9UPU7 963 aa4.92□□□□□ -1.62
ECHDC1-205ENST00000368295 ZNF644Q9H582 1327 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 ABL2P42684 1182 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 GPKOWQ92917 476 aaPredicted RBP eCLIP4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 CLUAP1Q96AJ1 413 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 POM121Q96HA1 1249 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 UNC93B1Q9H1C4 597 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 GDPD2Q9HCC8 539 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 FKBPLQ9UIM3 349 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 SERPINA10Q9UK55 444 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 C1orf167Q5SNV9 1468 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 IDI1Q13907 227 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 FAM196AQ6ZSG2 479 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 MTFR1LQ9H019 292 aa4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 DNMT3AQ9Y6K1 912 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-205ENST00000368295 MAP3K5Q99683 1374 aa4.9□□□□□ -1.62
ECHDC1-205ENST00000368295 ADGRB3O60242 1522 aa4.9□□□□□ -1.62
ECHDC1-205ENST00000368295 ZBTB24O43167 697 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-205ENST00000368295 RPIAP49247 311 aa4.9□□□□□ -1.63
ECHDC1-205ENST00000368295 EPS8L1Q8TE68 723 aa4.9□□□□□ -1.63
ECHDC1-205ENST00000368295 NOS1P29475 1434 aa4.9□□□□□ -1.63
ECHDC1-205ENST00000368295 DCCP43146 1447 aa4.9□□□□□ -1.63
ECHDC1-205ENST00000368295 GPAT2Q6NUI2 795 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 CLIP1P30622 1438 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 TRPM2O94759 1503 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 GRIN3BO60391 1043 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 LBX1P52954 281 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 WASHC4Q2M389 1173 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 PTCRAQ6ISU1 281 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 CDC42BPAQ5VT25 1732 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 A0A0C4DFX4 3053 aa4.89□□□□□ -1.63
ECHDC1-205ENST00000368295 PLCH1Q4KWH8 1693 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 PRXQ9BXM0 1461 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 PITPNM2Q9BZ72 1349 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 ADAMTS13Q76LX8 1427 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 TTC24A2A3L6 582 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 CCDC97Q96F63 343 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 PKNOX2Q96KN3 472 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 GPSM3Q9Y4H4 160 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 PLEKHG1Q9ULL1 1385 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 USP32Q8NFA0 1604 aa4.88□□□□□ -1.63
ECHDC1-205ENST00000368295 GPR37L1O60883 481 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 FGD1P98174 961 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 PTK2Q05397 1052 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 IRF5Q13568 498 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 PLA2G2CQ5R387 149 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 PDXDC2PQ6P474 469 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 ZNF330Q9Y3S2 320 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 TBX22Q9Y458 520 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 ABCC5O15440 1437 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 ZBBXA8MT70 800 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 FOXO3O43524 673 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 CD2BP2O95400 341 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 NCLP19338 710 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 TRIM32Q13049 653 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 NR1H3Q13133 447 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 RETREG2Q8NC44 543 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 PRDM10Q9NQV6 1147 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 CEP152O94986 1710 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 PXDNQ92626 1479 aa4.87□□□□□ -1.63
ECHDC1-205ENST00000368295 THSD7AQ9UPZ6 1657 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 LAMC1P11047 1609 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 ADAM23O75077 832 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 WNT7BP56706 349 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 BAP1Q92560 729 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 ARHGAP9Q9BRR9 750 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 BTG4Q9NY30 223 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 MKRN1Q9UHC7 482 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 BRPF3Q9ULD4 1205 aa4.86□□□□□ -1.63
ECHDC1-205ENST00000368295 SOX11P35716 441 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 SLC15A2Q16348 729 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 SH3BP5LQ7L8J4 393 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 BPHLQ86WA6 291 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 ANKRD13AQ8IZ07 590 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 STK32BQ9NY57 414 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 ZFYVE9O95405 1425 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms