RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 GMPRP36959 345 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 UBAP2LQ14157 1087 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 STAG2Q8N3U4 1231 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 GMCL1Q96IK5 515 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 C2orf49Q9BVC5 232 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 CRISPLD1Q9H336 500 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 RUBCNLQ9H714 662 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 ZDHHC3Q9NYG2 299 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 SLAIN2Q9P270 581 aa7.7□□□□□ -1.18
ECHDC1-204ENST00000368292 CDC14CA4D256 554 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 IGFBP4P22692 258 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 SWI5Q1ZZU3 235 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 SV2AQ7L0J3 742 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 C1orf216Q8TAB5 229 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 KLRG1Q96E93 195 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 RGS17Q9UGC6 210 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 ZNF232Q9UNY5 417 aa7.69□□□□□ -1.18
ECHDC1-204ENST00000368292 DISP1Q96F81 1524 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 H7C1W4 665 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 OCLNQ16625 522 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 NBPF1Q3BBV0 1214 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 ZIC5Q96T25 663 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 HCN4Q9Y3Q4 1203 aa7.68□□□□□ -1.18
ECHDC1-204ENST00000368292 SETD1AO15047 1707 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 TMEM88BA6NKF7 163 aa7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 KRT76Q01546 638 aa7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
ECHDC1-204ENST00000368292 A0A1W2PNR3 127 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 WIPF1O43516 503 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 PRMT3O60678 531 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 TATP17735 454 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 PDE4CQ08493 712 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 C1orf53Q5VUE5 145 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 PGBD3Q8N328 593 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 CLP1Q92989 425 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 CARMIL2Q6F5E8 1435 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 SRCAPQ6ZRS2 3230 aa7.66□□□□□ -1.18
ECHDC1-204ENST00000368292 GPR25O00155 361 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 FKBP5Q13451 457 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 GAS6Q14393 721 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 ARSJQ5FYB0 599 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 RNFT1Q5M7Z0 435 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 ALDH16A1Q8IZ83 802 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 PHACTR1Q9C0D0 580 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 NDFIP2Q9NV92 336 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
ECHDC1-204ENST00000368292 RICTORQ6R327 1708 aa7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 FOXO3O43524 673 aa7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 EFHC2Q5JST6 749 aa7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 NLRP8Q86W28 1048 aa7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 ZCCHC2Q9C0B9 1178 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 HCN2Q9UL51 889 aa7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 CDK11AQ9UQ88 783 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-204ENST00000368292 IQGAP2Q13576 1575 aa7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 ARHGEF12Q9NZN5 1544 aa7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 ZNF335Q9H4Z2 1342 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 CDK11BP21127 795 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 CEBPAP49715 358 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 BICDL1Q6ZP65 573 aa7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 CXXC1Q9P0U4 656 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 ALKQ9UM73 1620 aa7.63□□□□□ -1.19
ECHDC1-204ENST00000368292 FANCAO15360 1455 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 NCOA1Q15788 1441 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 UHRF1BP1Q6BDS2 1440 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 BNIP3LO60238 219 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 CAPN12Q6ZSI9 719 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 RHPN1Q8TCX5 695 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 CNTNAP3BQ96NU0 1288 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 CNTNAP3Q9BZ76 1288 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 GPC6Q9Y625 555 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 ABCA9Q8IUA7 1624 aa7.62□□□□□ -1.19
ECHDC1-204ENST00000368292 BRD1O95696 1058 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 FOXR1Q6PIV2 292 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 NGLY1Q96IV0 654 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 CFHR5Q9BXR6 569 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 PCDHGC4Q9Y5F7 938 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 POGZQ7Z3K3 1410 aa7.61□□□□□ -1.19
ECHDC1-204ENST00000368292 SETD1BQ9UPS6 1966 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 PHLDB1Q86UU1 1377 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 SAMD5Q5TGI4 173 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 LRRC69Q6ZNQ3 347 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 SUSD3Q96L08 255 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 GZF1Q9H116 711 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 CCDC9Q9Y3X0 531 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 NEO1Q92859 1461 aa7.6□□□□□ -1.19
ECHDC1-204ENST00000368292 KIAA0556O60303 1618 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms