RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
NUP43-203ENST00000367404 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
NUP43-203ENST00000367404 PDE6BP35913 854 aa13.24□□□□□ -0.29
NUP43-203ENST00000367404 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
NUP43-203ENST00000367404 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
NUP43-203ENST00000367404 ANKRD31Q8N7Z5 1873 aa13.24□□□□□ -0.29
NUP43-203ENST00000367404 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
NUP43-203ENST00000367404 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
NUP43-203ENST00000367404 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
NUP43-203ENST00000367404 TEFQ10587 303 aa13.23□□□□□ -0.29
NUP43-203ENST00000367404 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
NUP43-203ENST00000367404 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
NUP43-203ENST00000367404 TMEM92Q6UXU6 159 aa13.22□□□□□ -0.29
NUP43-203ENST00000367404 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
NUP43-203ENST00000367404 TBC1D2BQ9UPU7 963 aa13.22□□□□□ -0.29
NUP43-203ENST00000367404 C21orf2O43822 256 aa13.21□□□□□ -0.29
NUP43-203ENST00000367404 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
NUP43-203ENST00000367404 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP43-203ENST00000367404 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
NUP43-203ENST00000367404 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
NUP43-203ENST00000367404 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
NUP43-203ENST00000367404 SRGNP10124 158 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
NUP43-203ENST00000367404 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
NUP43-203ENST00000367404 A1BGP04217 495 aa13.19□□□□□ -0.3
NUP43-203ENST00000367404 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
NUP43-203ENST00000367404 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
NUP43-203ENST00000367404 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
NUP43-203ENST00000367404 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
NUP43-203ENST00000367404 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
NUP43-203ENST00000367404 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
NUP43-203ENST00000367404 ARFGEF2Q9Y6D5 1785 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 KCNQ3O43525 872 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
NUP43-203ENST00000367404 ST5P78524 1137 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
NUP43-203ENST00000367404 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
NUP43-203ENST00000367404 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
NUP43-203ENST00000367404 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
NUP43-203ENST00000367404 DZIP3Q86Y13 1208 aaKnown RBP13.17□□□□□ -0.3
NUP43-203ENST00000367404 C7orf43Q8WVR3 580 aa13.17□□□□□ -0.3
NUP43-203ENST00000367404 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
NUP43-203ENST00000367404 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
NUP43-203ENST00000367404 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
NUP43-203ENST00000367404 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
NUP43-203ENST00000367404 PRKAR2BP31323 418 aa13.16□□□□□ -0.3
NUP43-203ENST00000367404 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
NUP43-203ENST00000367404 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
NUP43-203ENST00000367404 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
NUP43-203ENST00000367404 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
NUP43-203ENST00000367404 PASKQ96RG2 1323 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 IQCA1LA6NCM1 817 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 NBPF5PQ86XG9 351 aaPredicted RBP13.14□□□□□ -0.31
NUP43-203ENST00000367404 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
NUP43-203ENST00000367404 NPHP1O15259 732 aa13.13□□□□□ -0.31
NUP43-203ENST00000367404 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
NUP43-203ENST00000367404 NPR1P16066 1061 aa13.13□□□□□ -0.31
NUP43-203ENST00000367404 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
NUP43-203ENST00000367404 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUP43-203ENST00000367404 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
NUP43-203ENST00000367404 TAF1DQ9H5J8 278 aaPredicted RBP13.13□□□□□ -0.31
NUP43-203ENST00000367404 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
NUP43-203ENST00000367404 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
NUP43-203ENST00000367404 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
NUP43-203ENST00000367404 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
NUP43-203ENST00000367404 MCM10Q7L590 875 aa13.11□□□□□ -0.31
NUP43-203ENST00000367404 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
NUP43-203ENST00000367404 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
NUP43-203ENST00000367404 NIP7Q9Y221 180 aaKnown RBP eCLIP13.1□□□□□ -0.31
NUP43-203ENST00000367404 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
NUP43-203ENST00000367404 SCN4AP35499 1836 aa13.09□□□□□ -0.31
NUP43-203ENST00000367404 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
NUP43-203ENST00000367404 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
NUP43-203ENST00000367404 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
NUP43-203ENST00000367404 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
NUP43-203ENST00000367404 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
NUP43-203ENST00000367404 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
NUP43-203ENST00000367404 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
NUP43-203ENST00000367404 FZD9O00144 591 aa13.08□□□□□ -0.32
NUP43-203ENST00000367404 FOXN1O15353 648 aa13.08□□□□□ -0.32
NUP43-203ENST00000367404 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
NUP43-203ENST00000367404 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
NUP43-203ENST00000367404 EMP3P54852 163 aa13.08□□□□□ -0.32
NUP43-203ENST00000367404 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.327e-9■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms