RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 RBM8AQ9Y5S9 174 aaKnown RBP13.27□□□□□ -0.28
NSL1-202ENST00000366977 COL15A1P39059 1388 aa13.27□□□□□ -0.29
NSL1-202ENST00000366977 ME3Q16798 604 aa13.27□□□□□ -0.29
NSL1-202ENST00000366977 FAM173BQ6P4H8 233 aa13.27□□□□□ -0.29
NSL1-202ENST00000366977 FIBPO43427 364 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.29
NSL1-202ENST00000366977 NECTIN1Q15223 517 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 CCDC129Q6ZRS4 1044 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 PDRG1Q9NUG6 133 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 LIMCH1Q9UPQ0 1083 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 CCDC171Q6TFL3 1326 aa13.26□□□□□ -0.29
NSL1-202ENST00000366977 GJB2P29033 226 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 GCKRQ14397 625 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 CREB3L3Q68CJ9 461 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
NSL1-202ENST00000366977 TPCN1Q9ULQ1 816 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 ADAMTS7Q9UKP4 1686 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 UTYO14607 1347 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 VSIG10Q8N0Z9 540 aa13.25□□□□□ -0.29
NSL1-202ENST00000366977 STX6O43752 255 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 ZSCAN22P10073 491 aaPredicted RBP13.24□□□□□ -0.29
NSL1-202ENST00000366977 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
NSL1-202ENST00000366977 TFCP2Q12800 502 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 UBE3BQ7Z3V4 1068 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
NSL1-202ENST00000366977 SLC27A2O14975 620 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 FSD1Q9BTV5 496 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
NSL1-202ENST00000366977 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
NSL1-202ENST00000366977 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
NSL1-202ENST00000366977 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 DBNLQ9UJU6 430 aaKnown RBP13.23□□□□□ -0.29
NSL1-202ENST00000366977 COL18A1P39060 1754 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 F13A1P00488 732 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
NSL1-202ENST00000366977 STK3Q13188 491 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
NSL1-202ENST00000366977 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
NSL1-202ENST00000366977 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
NSL1-202ENST00000366977 KCNJ4P48050 445 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
NSL1-202ENST00000366977 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 ZSCAN30Q86W11 494 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
NSL1-202ENST00000366977 MBD3O95983 291 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
NSL1-202ENST00000366977 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 CHMP3Q9Y3E7 222 aa13.22□□□□□ -0.29
NSL1-202ENST00000366977 TMEM94Q12767 1356 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.29
NSL1-202ENST00000366977 ERC1Q8IUD2 1116 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 NBPF15Q8N660 670 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 KCNB2Q92953 911 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
NSL1-202ENST00000366977 TSPY26PQ9H489 355 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 MST1RQ04912 1400 aa13.21□□□□□ -0.29
NSL1-202ENST00000366977 PPFIA3O75145 1194 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 ATF3P18847 181 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 TTLL7Q6ZT98 887 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.3
NSL1-202ENST00000366977 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.3
NSL1-202ENST00000366977 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.3
NSL1-202ENST00000366977 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
NSL1-202ENST00000366977 VPS53Q5VIR6 699 aa13.2□□□□□ -0.3
NSL1-202ENST00000366977 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
NSL1-202ENST00000366977 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
NSL1-202ENST00000366977 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
NSL1-202ENST00000366977 GLI3P10071 1580 aa13.2□□□□□ -0.3
NSL1-202ENST00000366977 A0A087WZG4 1122 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
NSL1-202ENST00000366977 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
NSL1-202ENST00000366977 A1BGP04217 495 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 HCLS1P14317 486 aaPredicted RBP13.19□□□□□ -0.3
NSL1-202ENST00000366977 NEXNQ0ZGT2 675 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 TNNI3KQ59H18 835 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 FPGT-TNNI3KV9GXZ4 949 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
NSL1-202ENST00000366977 ZNF609O15014 1411 aa13.18□□□□□ -0.3
NSL1-202ENST00000366977 HSPA2P54652 639 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms