RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 UBE2OQ9C0C9 1292 aaKnown RBP4.21□□□□□ -1.74
MIR539-201ENST00000365690 DNAJB12Q9NXW2 375 aaKnown RBP4.21□□□□□ -1.74
MIR539-201ENST00000365690 KCNH4Q9UQ05 1017 aa4.21□□□□□ -1.74
MIR539-201ENST00000365690 PCDHGA11Q9Y5H2 935 aa4.21□□□□□ -1.74
MIR539-201ENST00000365690 TBC1D8BQ0IIM8 1120 aa4.2□□□□□ -1.74
MIR539-201ENST00000365690 TBCELQ5QJ74 424 aa4.2□□□□□ -1.74
MIR539-201ENST00000365690 Q6ZS46 218 aa4.2□□□□□ -1.74
MIR539-201ENST00000365690 DTX1Q86Y01 620 aa4.2□□□□□ -1.74
MIR539-201ENST00000365690 CCER1Q8TC90 406 aaPredicted RBP4.2□□□□□ -1.74
MIR539-201ENST00000365690 LPIN3Q9BQK8 851 aa4.2□□□□□ -1.74
MIR539-201ENST00000365690 PRR19A6NJB7 356 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 RGS9O75916 674 aaPredicted RBP4.19□□□□□ -1.74
MIR539-201ENST00000365690 IGLV1-40P01703 118 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 BRPF1P55201 1214 aaPredicted RBP4.19□□□□□ -1.74
MIR539-201ENST00000365690 NEUROD1Q13562 356 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 SIRT1Q96EB6 747 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 CEP63Q96MT8 703 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 IGFLR1Q9H665 355 aa4.19□□□□□ -1.74
MIR539-201ENST00000365690 GPC6Q9Y625 555 aaPredicted RBP4.19□□□□□ -1.74
MIR539-201ENST00000365690 SFI1A8K8P3 1242 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 F8W735 103 aaPredicted RBP4.18□□□□□ -1.74
MIR539-201ENST00000365690 SLFNL1Q499Z3 407 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 TMEM130Q8N3G9 435 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 POU5F2Q8N7G0 328 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 AKTIPQ9H8T0 292 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 NDUFB9Q9Y6M9 179 aa4.18□□□□□ -1.74
MIR539-201ENST00000365690 ZBTB42B2RXF5 422 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 GRNP28799 593 aaKnown RBP4.17□□□□□ -1.74
MIR539-201ENST00000365690 POTEAQ6S8J7 498 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 RHPN1Q8TCX5 695 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 UBL7Q96S82 380 aaPredicted RBP4.17□□□□□ -1.74
MIR539-201ENST00000365690 GSX2Q9BZM3 304 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 SNRKQ9NRH2 765 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 ZNF358Q9NW07 568 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 RAXQ9Y2V3 346 aa4.17□□□□□ -1.74
MIR539-201ENST00000365690 IRF5Q13568 498 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 PERM1Q5SV97 790 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 SPOCD1Q6ZMY3 1216 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 SLC9A9Q8IVB4 645 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 ABI1Q8IZP0 508 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 PLPP7Q8NBV4 271 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.16□□□□□ -1.74
MIR539-201ENST00000365690 SUSD3Q96L08 255 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 GOPCQ9HD26 462 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 NEUROD4Q9HD90 331 aa4.16□□□□□ -1.74
MIR539-201ENST00000365690 CPB1P15086 417 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 FBLN7Q53RD9 439 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 NFXL1Q6ZNB6 911 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 FAM35AQ86V20 835 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 TNS4Q8IZW8 715 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 ARMC10Q8N2F6 343 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 AGGF1Q8N302 714 aaeCLIP4.15□□□□□ -1.75
MIR539-201ENST00000365690 ZNF232Q9UNY5 417 aa4.15□□□□□ -1.75
MIR539-201ENST00000365690 SERTM1A2A2V5 107 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 WNT11O96014 354 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 COL19A1Q14993 1142 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 MAP7D1Q3KQU3 841 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 C1orf53Q5VUE5 145 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 CBLL1Q75N03 491 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 WFDC8Q8IUA0 241 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 TTC9Q92623 222 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 FRRS1LQ9P0K9 344 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 HCN4Q9Y3Q4 1203 aa4.14□□□□□ -1.75
MIR539-201ENST00000365690 GSC2O15499 205 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 NFKB1P19838 968 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 NFIAQ12857 509 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 INTS5Q6P9B9 1019 aaKnown RBP4.13□□□□□ -1.75
MIR539-201ENST00000365690 BANK1Q8NDB2 785 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 PCMTD1Q96MG8 357 aaPredicted RBP4.13□□□□□ -1.75
MIR539-201ENST00000365690 PHACTR1Q9C0D0 580 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 MRPL18Q9H0U6 180 aaKnown RBP4.13□□□□□ -1.75
MIR539-201ENST00000365690 ZFATQ9P243 1243 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 STOML1Q9UBI4 398 aa4.13□□□□□ -1.75
MIR539-201ENST00000365690 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.13□□□□□ -1.75
MIR539-201ENST00000365690 PIK3CDO00329 1044 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 BACH1O14867 736 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 PTCD1O75127 700 aaKnown RBP4.12□□□□□ -1.75
MIR539-201ENST00000365690 HOXA10P31260 410 aaPredicted RBP4.12□□□□□ -1.75
MIR539-201ENST00000365690 HIRAP54198 1017 aaPredicted RBP4.12□□□□□ -1.75
MIR539-201ENST00000365690 EIF4G2P78344 907 aaKnown RBP eCLIP4.12□□□□□ -1.75
MIR539-201ENST00000365690 BTLAQ7Z6A9 289 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 TRIM42Q8IWZ5 723 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 C7orf69Q9H7B7 122 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 EFCC1Q9HA90 598 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 TBC1D2BQ9UPU7 963 aa4.12□□□□□ -1.75
MIR539-201ENST00000365690 HMX2A2RU54 273 aa4.11□□□□□ -1.75
MIR539-201ENST00000365690 ITGB5P18084 799 aa4.11□□□□□ -1.75
MIR539-201ENST00000365690 SETDB1Q15047 1291 aa4.11□□□□□ -1.75
MIR539-201ENST00000365690 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.11□□□□□ -1.75
MIR539-201ENST00000365690 TRPM4Q8TD43 1214 aa4.11□□□□□ -1.75
MIR539-201ENST00000365690 ANKIB1Q9P2G1 1089 aa4.11□□□□□ -1.75
MIR539-201ENST00000365690 TM4SF5O14894 197 aa4.1□□□□□ -1.75
MIR539-201ENST00000365690 GLB1P16278 677 aa4.1□□□□□ -1.75
MIR539-201ENST00000365690 MLLT1Q03111 559 aaPredicted RBP4.1□□□□□ -1.75
MIR539-201ENST00000365690 CCINQ13939 588 aa4.1□□□□□ -1.75
MIR539-201ENST00000365690 RNF43Q68DV7 783 aa4.1□□□□□ -1.75
MIR539-201ENST00000365690 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
MIR539-201ENST00000365690 TSPAN10Q9H1Z9 355 aaPredicted RBP4.1□□□□□ -1.75
MIR539-201ENST00000365690 DMGDHQ9UI17 866 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms