RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 BCRP11274 1271 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 C11orf91Q3C1V1 193 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 FAM26DQ5JW98 314 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 GALNT6Q8NCL4 622 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 PRR12Q9ULL5 1215 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
RNU4-28P-201ENST00000364739 IFT43Q96FT9 208 aa8.96□□□□□ -0.98
RNU4-28P-201ENST00000364739 MYO19Q96H55 970 aa8.96□□□□□ -0.98
RNU4-28P-201ENST00000364739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.96□□□□□ -0.98
RNU4-28P-201ENST00000364739 SHISA8B8ZZ34 492 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 TGFBR3LH3BV60 316 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 MICAL2O94851 1124 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 LAMC2Q13753 1193 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 FAM182BQ5T319 152 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 BEND7Q8N7W2 519 aaPredicted RBP8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 KCNH4Q9UQ05 1017 aa8.95□□□□□ -0.98
RNU4-28P-201ENST00000364739 MSTNO14793 375 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 OIP5O43482 229 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 GRNP28799 593 aaKnown RBP8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 IDH3AP50213 366 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 C16orf46Q6P387 395 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 PODNQ7Z5L7 613 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 NEDD1Q8NHV4 660 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 EDARADDQ8WWZ3 215 aa8.94□□□□□ -0.98
RNU4-28P-201ENST00000364739 OPLAHO14841 1288 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 ARAFP10398 606 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 SSFA2P28290 1259 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 INPP5BP32019 993 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 HIF1AQ16665 826 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 PHLDB3Q6NSJ2 640 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 SYT9Q86SS6 491 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 FCHSD1Q86WN1 690 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 CNTNAP5Q8WYK1 1306 aa8.93□□□□□ -0.98
RNU4-28P-201ENST00000364739 TNFRSF10BO14763 440 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 IER5Q5VY09 327 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 TREML1Q86YW5 311 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 GOLGA6L1Q8N7Z2 621 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 RETREG2Q8NC44 543 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 COL26A1Q96A83 441 aa8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 GDF2Q9UK05 429 aaPredicted RBP8.92□□□□□ -0.98
RNU4-28P-201ENST00000364739 ADAM23O75077 832 aa8.91□□□□□ -0.98
RNU4-28P-201ENST00000364739 PTCD1O75127 700 aaKnown RBP8.91□□□□□ -0.98
RNU4-28P-201ENST00000364739 KCNQ4P56696 695 aa8.91□□□□□ -0.98
RNU4-28P-201ENST00000364739 BHMTQ93088 406 aa8.91□□□□□ -0.98
RNU4-28P-201ENST00000364739 SPOCK3Q9BQ16 436 aa8.91□□□□□ -0.98
RNU4-28P-201ENST00000364739 ZBTB39O15060 712 aa8.9□□□□□ -0.98
RNU4-28P-201ENST00000364739 EPXP11678 715 aa8.9□□□□□ -0.98
RNU4-28P-201ENST00000364739 ADH6P28332 368 aa8.9□□□□□ -0.98
RNU4-28P-201ENST00000364739 RGL4Q8IZJ4 473 aa8.9□□□□□ -0.98
RNU4-28P-201ENST00000364739 ITGB2P05107 769 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 SNRPNP63162 240 aaKnown RBP8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 SLCO4C1Q6ZQN7 724 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 CMTR1Q8N1G2 835 aaKnown RBP8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 GSX2Q9BZM3 304 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 IGFLR1Q9H665 355 aa8.89□□□□□ -0.99
RNU4-28P-201ENST00000364739 AMPD1P23109 780 aa8.88□□□□□ -0.99
RNU4-28P-201ENST00000364739 ARSDP51689 593 aa8.88□□□□□ -0.99
RNU4-28P-201ENST00000364739 BTBD6Q96KE9 485 aa8.88□□□□□ -0.99
RNU4-28P-201ENST00000364739 RRAGCQ9HB90 399 aa8.88□□□□□ -0.99
RNU4-28P-201ENST00000364739 RTCBQ9Y3I0 505 aaKnown RBP8.88□□□□□ -0.99
RNU4-28P-201ENST00000364739 PROCP04070 461 aa8.87□□□□□ -0.99
RNU4-28P-201ENST00000364739 TARSP26639 723 aaKnown RBP8.87□□□□□ -0.99
RNU4-28P-201ENST00000364739 TBC1D8BQ0IIM8 1120 aa8.87□□□□□ -0.99
RNU4-28P-201ENST00000364739 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
RNU4-28P-201ENST00000364739 STIM2Q9P246 746 aa8.87□□□□□ -0.99
RNU4-28P-201ENST00000364739 SASH3O75995 380 aa8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 CCINQ13939 588 aa8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 XP32Q5T750 250 aa8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
RNU4-28P-201ENST00000364739 NFKB1P19838 968 aa8.85□□□□□ -0.99
RNU4-28P-201ENST00000364739 PNMA5Q96PV4 448 aa8.85□□□□□ -0.99
RNU4-28P-201ENST00000364739 ZFATQ9P243 1243 aa8.85□□□□□ -0.99
RNU4-28P-201ENST00000364739 USTQ9Y2C2 406 aa8.85□□□□□ -0.99
RNU4-28P-201ENST00000364739 SIN3BO75182 1162 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 EPB42P16452 691 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 HOXB4P17483 251 aaPredicted RBP8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 ZAP70P43403 619 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 CHSY3Q70JA7 882 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 GPR152Q8TDT2 470 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 KCNMB2Q9Y691 235 aa8.84□□□□□ -0.99
RNU4-28P-201ENST00000364739 ABL1P00519 1130 aa8.83□□□□□ -1
RNU4-28P-201ENST00000364739 NEUROD1Q13562 356 aa8.83□□□□□ -1
RNU4-28P-201ENST00000364739 ALYREFQ86V81 257 aaKnown RBP8.83□□□□□ -1
RNU4-28P-201ENST00000364739 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
RNU4-28P-201ENST00000364739 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
RNU4-28P-201ENST00000364739 XYLBO75191 536 aa8.82□□□□□ -1
RNU4-28P-201ENST00000364739 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
RNU4-28P-201ENST00000364739 ELOA3Q8NG57 546 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms