RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 PDE6BP35913 854 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 CALD1Q05682 793 aaKnown RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 EXOSC9Q06265 439 aaKnown RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 CCDC27Q2M243 656 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 TWISTNBQ3B726 338 aaPredicted RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 C9orf131Q5VYM1 1079 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 PRPF40BQ6NWY9 871 aaKnown RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 TPTE2Q6XPS3 522 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 NLRP10Q86W26 655 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 MIER1Q8N108 512 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 MASTLQ96GX5 879 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 RNF181Q9P0P0 153 aa4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 DBF4Q9UBU7 674 aaPredicted RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 IBTKQ9P2D0 1353 aaPredicted RBP4.5□□□□□ -1.69
RNU4-35P-201ENST00000362588 IL16Q14005 1332 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 RIC1Q4ADV7 1423 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 SNED1Q8TER0 1413 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 GOLGA2Q08379 1002 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 TCIRG1Q13488 830 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 PARP10Q53GL7 1025 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 DIEXFQ68CQ4 756 aaKnown RBP4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 STYK1Q6J9G0 422 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 ANKRD13DQ6ZTN6 518 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 PPP1R42Q7Z4L9 355 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 PLBD2Q8NHP8 589 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 FAM89AQ96GI7 184 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 CDCA7LQ96GN5 454 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 MYD88Q99836 296 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 UTP14AQ9BVJ6 771 aaKnown RBP4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 NYXQ9GZU5 481 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 NMRK2Q9NPI5 230 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 HYPKQ9NX55 129 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 TRMT112Q9UI30 125 aaKnown RBP4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 LTBP1Q14766 1721 aa4.49□□□□□ -1.69
RNU4-35P-201ENST00000362588 DUOX1Q9NRD9 1551 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF521Q96K83 1311 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 SCN9AQ15858 1988 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 F6X3S4 739 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 RGL2O15211 777 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 VAMP4O75379 141 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 SLC4A2P04920 1241 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 NPR1P16066 1061 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 CRY2Q49AN0 593 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 HSP90AB3PQ58FF7 597 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 CCDC30Q5VVM6 783 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 RIC3Q7Z5B4 369 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 WDR63Q8IWG1 891 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 C7orf43Q8WVR3 580 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 CNKSR1Q969H4 720 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 CCDC85AQ96PX6 553 aaPredicted RBP4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 ISCA1Q9BUE6 129 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 STK31Q9BXU1 1019 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 GPBP1L1Q9HC44 474 aaPredicted RBP4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF277Q9NRM2 450 aaPredicted RBP4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 MAP3K2Q9Y2U5 619 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 WDR90Q96KV7 1748 aa4.48□□□□□ -1.69
RNU4-35P-201ENST00000362588 ABCC4O15439 1325 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 SH3TC1Q8TE82 1336 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 PI4KAP2A4QPH2 592 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 CCER2I3L3R5 266 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 IRS4O14654 1257 aaPredicted RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 KIF3CO14782 793 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 PPEF1O14829 653 aaPredicted RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 IGKV5-2P06315 115 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 FLIIQ13045 1269 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 FKBP5Q13451 457 aaPredicted RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 CWF19L2Q2TBE0 894 aaKnown RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 CCDC93Q567U6 631 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 PI4KAP1Q8N8J0 262 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 CELF1Q92879 486 aaKnown RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 RBM17Q96I25 401 aaKnown RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 NLRP3Q96P20 1036 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 METTL22Q9BUU2 404 aaPredicted RBP4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 BCL2L13Q9BXK5 485 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 TAOK3Q9H2K8 898 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 SEC31BQ9NQW1 1179 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 PDZRN3Q9UPQ7 1066 aa4.47□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF541Q9H0D2 1346 aa4.46□□□□□ -1.69
RNU4-35P-201ENST00000362588 ZNF646O15015 1829 aaPredicted RBP4.46□□□□□ -1.69
RNU4-35P-201ENST00000362588 SCN4AP35499 1836 aa4.46□□□□□ -1.69
RNU4-35P-201ENST00000362588 PSME4Q14997 1843 aa4.46□□□□□ -1.69
RNU4-35P-201ENST00000362588 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 DDX58O95786 925 aaKnown RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 LMNB1P20700 586 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 HOXA10P31260 410 aaPredicted RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 C1QTNF8P60827 252 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 FKBP4Q02790 459 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 NCBP3Q53F19 620 aaKnown RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 SLC10A5Q5PT55 438 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 KSR2Q6VAB6 950 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 DDX46Q7L014 1031 aaKnown RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 DNAAF4Q8WXU2 420 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 GPR101Q96P66 508 aaPredicted RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 CRAMP1Q96RY5 1269 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 RRAGCQ9HB90 399 aa4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 CWC25Q9NXE8 425 aaPredicted RBP4.46□□□□□ -1.7
RNU4-35P-201ENST00000362588 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms