RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SFPQP23246 707 aaKnown RBP eCLIP19.08■□□□□ 0.65
SCAF1-201ENST00000360565 SYNMO15061 1565 aa19.08■□□□□ 0.65
SCAF1-201ENST00000360565 USP19O94966 1318 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 ANKRD18BA2A2Z9 1011 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 CTAGE5O15320 804 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 GSPT1P15170 499 aaKnown RBP19.08■□□□□ 0.64
SCAF1-201ENST00000360565 CABLES1Q8TDN4 633 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 SMARCE1Q969G3 411 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 NOL7Q9UMY1 257 aaKnown RBP19.08■□□□□ 0.64
SCAF1-201ENST00000360565 MAP3K12Q12852 859 aa19.08■□□□□ 0.64
SCAF1-201ENST00000360565 BIN1O00499 593 aa19.07■□□□□ 0.64
SCAF1-201ENST00000360565 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
SCAF1-201ENST00000360565 RNMTO43148 476 aaKnown RBP19.06■□□□□ 0.64
SCAF1-201ENST00000360565 CREB3L3Q68CJ9 461 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 DACT1Q9NYF0 836 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 SYT1P21579 422 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 C16orf45Q96MC5 204 aaPredicted RBP19.06■□□□□ 0.64
SCAF1-201ENST00000360565 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 PTPN14Q15678 1187 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 MCMDC2Q4G0Z9 681 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
SCAF1-201ENST00000360565 HSP90B2PQ58FF3 399 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
SCAF1-201ENST00000360565 CCAR1Q8IX12 1150 aaKnown RBP19.06■□□□□ 0.64
SCAF1-201ENST00000360565 BICC1Q9H694 974 aaKnown RBP19.05■□□□□ 0.64
SCAF1-201ENST00000360565 DDX21Q9NR30 783 aaKnown RBP eCLIP19.05■□□□□ 0.64
SCAF1-201ENST00000360565 YEATS2Q9ULM3 1422 aa19.05■□□□□ 0.64
SCAF1-201ENST00000360565 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
SCAF1-201ENST00000360565 MICU3Q86XE3 530 aa19.05■□□□□ 0.64
SCAF1-201ENST00000360565 Q6ZUG5 572 aa19.05■□□□□ 0.64
SCAF1-201ENST00000360565 PDCL2Q8N4E4 241 aa19.05■□□□□ 0.64
SCAF1-201ENST00000360565 MAGEC2Q9UBF1 373 aaPredicted RBP19.05■□□□□ 0.64
SCAF1-201ENST00000360565 MYOM2P54296 1465 aa19.05■□□□□ 0.64
SCAF1-201ENST00000360565 CCDC144CPQ8IYA2 1237 aa19.04■□□□□ 0.64
SCAF1-201ENST00000360565 ZSCAN16Q9H4T2 348 aaPredicted RBP19.04■□□□□ 0.64
SCAF1-201ENST00000360565 SLC12A7Q9Y666 1083 aa19.04■□□□□ 0.64
SCAF1-201ENST00000360565 OFD1O75665 1012 aa19.04■□□□□ 0.64
SCAF1-201ENST00000360565 GOLGA8AA7E2F4 631 aa19.04■□□□□ 0.64
SCAF1-201ENST00000360565 TTC12Q9H892 705 aaPredicted RBP19.04■□□□□ 0.64
SCAF1-201ENST00000360565 TRMT1Q9NXH9 659 aaKnown RBP19.04■□□□□ 0.64
SCAF1-201ENST00000360565 ZKSCAN5Q9Y2L8 839 aa19.04■□□□□ 0.64
SCAF1-201ENST00000360565 DTNBO60941 627 aa19.03■□□□□ 0.64
SCAF1-201ENST00000360565 CDK5RAP3Q96JB5 506 aa19.03■□□□□ 0.64
SCAF1-201ENST00000360565 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
SCAF1-201ENST00000360565 CCDC196A0A1B0GTZ2 297 aa19.03■□□□□ 0.64
SCAF1-201ENST00000360565 ZCRB1Q8TBF4 217 aaKnown RBP19.03■□□□□ 0.64
SCAF1-201ENST00000360565 RRAGDQ9NQL2 400 aaPredicted RBP19.03■□□□□ 0.64
SCAF1-201ENST00000360565 KIAA0232Q92628 1395 aa19.03■□□□□ 0.64
SCAF1-201ENST00000360565 KLF18A0A0U1RQI7 1052 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 TNNT1P13805 278 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 RTL1A6NKG5 1358 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 SGSM2O43147 1006 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 ATP2B2Q01814 1243 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 KLHL10Q6JEL2 608 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 NCOA7Q8NI08 942 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 KLHDC4Q8TBB5 520 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 CAGE1Q8TC20 777 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 CCDC171Q6TFL3 1326 aa19.02■□□□□ 0.64
SCAF1-201ENST00000360565 SLC5A1P13866 664 aa19.02■□□□□ 0.63
SCAF1-201ENST00000360565 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.63
SCAF1-201ENST00000360565 BABAM1Q9NWV8 329 aa19.02■□□□□ 0.63
SCAF1-201ENST00000360565 LTKP29376 864 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
SCAF1-201ENST00000360565 STX1AQ16623 288 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 FAM200AQ8TCP9 573 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 RBSNQ9H1K0 784 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 TFCP2Q12800 502 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 ISM2Q6H9L7 571 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 RANBP6O60518 1105 aaKnown RBP19.01■□□□□ 0.63
SCAF1-201ENST00000360565 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
SCAF1-201ENST00000360565 ANO6Q4KMQ2 910 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 NBPF6Q5VWK0 638 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 NBPF4Q96M43 638 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 USP44Q9H0E7 712 aa19.01■□□□□ 0.63
SCAF1-201ENST00000360565 RUFY3Q7L099 469 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 STIM1Q13586 685 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 TMEM67Q5HYA8 995 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 ACBD3Q9H3P7 528 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 TCEAL9Q9UHQ7 104 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 CHST3Q7LGC8 479 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 CNNM3Q8NE01 707 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 IL17REQ8NFR9 667 aa19■□□□□ 0.63
SCAF1-201ENST00000360565 EPS15P42566 896 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 KIF18AQ8NI77 898 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 ORAI2Q96SN7 254 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 PAG1Q9NWQ8 432 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 CEP131Q9UPN4 1083 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 NEO1Q92859 1461 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 NPHP3Q7Z494 1330 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 EXOC5O00471 708 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 HOXB7P09629 217 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 CAVIN4Q5BKX8 364 aa18.99■□□□□ 0.63
SCAF1-201ENST00000360565 METAP2P50579 478 aaKnown RBP eCLIP18.99■□□□□ 0.636e-6■■■□□ 18.6
SCAF1-201ENST00000360565 ZNHIT6Q9NWK9 470 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms