RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 USP26Q9BXU7 913 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 ZBTB3Q9H5J0 574 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 ZBTB1Q9Y2K1 713 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 ZNF330Q9Y3S2 320 aaPredicted RBP24.78■■□□□ 1.56
CBWD3-201ENST00000360171 ATP5J2-PTCD1G3V325 749 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 GCKRQ14397 625 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 SEPT12Q8IYM1 358 aa24.78■■□□□ 1.56
CBWD3-201ENST00000360171 ATP6V1AP38606 617 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 ITPK1Q13572 414 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 PPP1R42Q7Z4L9 355 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 SUCLG2Q96I99 432 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 CASC1Q6TDU7 716 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 SSH3Q8TE77 659 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 KAZALD1Q96I82 304 aa24.76■■□□□ 1.55
CBWD3-201ENST00000360171 SSFA2P28290 1259 aa24.75■■□□□ 1.55
CBWD3-201ENST00000360171 NUCB2P80303 420 aa24.75■■□□□ 1.55
CBWD3-201ENST00000360171 POLA2Q14181 598 aa24.75■■□□□ 1.55
CBWD3-201ENST00000360171 KLHL40Q2TBA0 621 aa24.75■■□□□ 1.55
CBWD3-201ENST00000360171 SMARCC1Q92922 1105 aaPredicted RBP24.75■■□□□ 1.55
CBWD3-201ENST00000360171 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
CBWD3-201ENST00000360171 EXOC6BQ9Y2D4 811 aa24.74■■□□□ 1.55
CBWD3-201ENST00000360171 APBB1O00213 710 aa24.74■■□□□ 1.55
CBWD3-201ENST00000360171 NUP98P52948 1817 aa24.74■■□□□ 1.55
CBWD3-201ENST00000360171 BAG4O95429 457 aaKnown RBP24.73■■□□□ 1.55
CBWD3-201ENST00000360171 GAS2L3Q86XJ1 694 aa24.73■■□□□ 1.55
CBWD3-201ENST00000360171 CWC22Q9HCG8 908 aaKnown RBP24.73■■□□□ 1.55
CBWD3-201ENST00000360171 SRGAP3O43295 1099 aa24.72■■□□□ 1.55
CBWD3-201ENST00000360171 SMARCA5O60264 1052 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-201ENST00000360171 CYP2E1P05181 493 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-201ENST00000360171 MTX1Q13505 466 aa24.72■■□□□ 1.55
CBWD3-201ENST00000360171 INTS5Q6P9B9 1019 aaKnown RBP24.72■■□□□ 1.55
CBWD3-201ENST00000360171 JARID2Q92833 1246 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-201ENST00000360171 FOXD4L1Q9NU39 408 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 LY75O60449 1722 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 AK9Q5TCS8 1911 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 SDSP20132 328 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 CRKLP46109 303 aaKnown RBP24.71■■□□□ 1.55
CBWD3-201ENST00000360171 KIF6Q6ZMV9 814 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 C16orf71Q8IYS4 520 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-201ENST00000360171 OSBPL3Q9H4L5 887 aa24.71■■□□□ 1.55
CBWD3-201ENST00000360171 BICC1Q9H694 974 aaKnown RBP24.71■■□□□ 1.55
CBWD3-201ENST00000360171 REC8O95072 547 aa24.7■■□□□ 1.55
CBWD3-201ENST00000360171 CCDC87Q9NVE4 849 aa24.7■■□□□ 1.55
CBWD3-201ENST00000360171 IL6STP40189 918 aaPredicted RBP24.7■■□□□ 1.54
CBWD3-201ENST00000360171 MAP3K15Q6ZN16 1313 aa24.7■■□□□ 1.54
CBWD3-201ENST00000360171 UBE3BQ7Z3V4 1068 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 HDAC5Q9UQL6 1122 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 TUBGCP6Q96RT7 1819 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 A0A087WZG4 1122 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 ESPNB1AK53 854 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 CASP7P55210 303 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 EPHA10Q5JZY3 1008 aa24.69■■□□□ 1.54
CBWD3-201ENST00000360171 ST18O60284 1047 aa24.68■■□□□ 1.54
CBWD3-201ENST00000360171 ISCA1Q9BUE6 129 aa24.68■■□□□ 1.54
CBWD3-201ENST00000360171 HLFQ16534 295 aa24.67■■□□□ 1.54
CBWD3-201ENST00000360171 CWC25Q9NXE8 425 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-201ENST00000360171 TAF1LQ8IZX4 1826 aa24.67■■□□□ 1.54
CBWD3-201ENST00000360171 EIF5P55010 431 aaKnown RBP24.67■■□□□ 1.54
CBWD3-201ENST00000360171 KCNQ4P56696 695 aa24.67■■□□□ 1.54
CBWD3-201ENST00000360171 TCIRG1Q13488 830 aa24.67■■□□□ 1.54
CBWD3-201ENST00000360171 OTUD7AQ8TE49 926 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-201ENST00000360171 COL15A1P39059 1388 aa24.66■■□□□ 1.54
CBWD3-201ENST00000360171 CCDC191Q8NCU4 936 aa24.66■■□□□ 1.54
CBWD3-201ENST00000360171 LINC00116Q8NCU8 138 aa24.66■■□□□ 1.54
CBWD3-201ENST00000360171 TRIM44Q96DX7 344 aaPredicted RBP24.66■■□□□ 1.54
CBWD3-201ENST00000360171 DDX49Q9Y6V7 483 aaKnown RBP24.66■■□□□ 1.54
CBWD3-201ENST00000360171 H7C1W4 665 aa24.65■■□□□ 1.54
CBWD3-201ENST00000360171 GIGYF2Q6Y7W6 1299 aaKnown RBP24.65■■□□□ 1.54
CBWD3-201ENST00000360171 ERC2O15083 957 aa24.64■■□□□ 1.54
CBWD3-201ENST00000360171 SURF6O75683 361 aaKnown RBP24.64■■□□□ 1.54
CBWD3-201ENST00000360171 CCDC173Q0VFZ6 552 aa24.64■■□□□ 1.54
CBWD3-201ENST00000360171 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.54
CBWD3-201ENST00000360171 PPP1R9BQ96SB3 815 aa24.64■■□□□ 1.54
CBWD3-201ENST00000360171 TBC1D2BQ9UPU7 963 aa24.64■■□□□ 1.54
CBWD3-201ENST00000360171 EP400Q96L91 3159 aa24.64■■□□□ 1.53
CBWD3-201ENST00000360171 ZNF445P59923 1031 aa24.64■■□□□ 1.53
CBWD3-201ENST00000360171 LRRCC1Q9C099 1032 aa24.64■■□□□ 1.53
CBWD3-201ENST00000360171 BCORQ6W2J9 1755 aa24.64■■□□□ 1.53
CBWD3-201ENST00000360171 ZNF772Q68DY9 489 aaPredicted RBP24.63■■□□□ 1.53
CBWD3-201ENST00000360171 PA2G4Q9UQ80 394 aaKnown RBP24.62■■□□□ 1.53
CBWD3-201ENST00000360171 TRIM28Q13263 835 aaKnown RBP24.61■■□□□ 1.53
CBWD3-201ENST00000360171 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
CBWD3-201ENST00000360171 PDE1AP54750 535 aa24.6■■□□□ 1.53
CBWD3-201ENST00000360171 RABL6Q3YEC7 729 aaPredicted RBP24.6■■□□□ 1.53
CBWD3-201ENST00000360171 ERVV-1B6SEH8 477 aa24.6■■□□□ 1.53
CBWD3-201ENST00000360171 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
CBWD3-201ENST00000360171 RBM6P78332 1123 aaKnown RBP24.6■■□□□ 1.53
CBWD3-201ENST00000360171 LMBRD1Q9NUN5 540 aa24.6■■□□□ 1.53
CBWD3-201ENST00000360171 PRKCSHP14314 528 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-201ENST00000360171 GPTP24298 496 aa24.59■■□□□ 1.53
CBWD3-201ENST00000360171 NASPP49321 788 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-201ENST00000360171 SALL3Q9BXA9 1300 aa24.59■■□□□ 1.53
CBWD3-201ENST00000360171 FOXO4P98177 505 aa24.59■■□□□ 1.53
CBWD3-201ENST00000360171 CNTNAP4Q9C0A0 1308 aa24.58■■□□□ 1.53
CBWD3-201ENST00000360171 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.53
CBWD3-201ENST00000360171 BCL11BQ9C0K0 894 aaPredicted RBP24.58■■□□□ 1.53
CBWD3-201ENST00000360171 IL1RAPL2Q9NP60 686 aa24.58■■□□□ 1.53
CBWD3-201ENST00000360171 HSP90AB3PQ58FF7 597 aa24.57■■□□□ 1.52
CBWD3-201ENST00000360171 MCTP1Q6DN14 999 aa24.57■■□□□ 1.52
CBWD3-201ENST00000360171 MCM2P49736 904 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms