RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 NTSR2O95665 410 aa24.35■■□□□ 1.49
HLA-DRB1-201ENST00000360004 ERFEQ4G0M1 354 aa24.35■■□□□ 1.49
HLA-DRB1-201ENST00000360004 C2CD5Q86YS7 1000 aa24.35■■□□□ 1.49
HLA-DRB1-201ENST00000360004 WWC3Q9ULE0 1092 aa24.35■■□□□ 1.49
HLA-DRB1-201ENST00000360004 DPEP1P16444 411 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 CCDC191Q8NCU4 936 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 PDZRN3Q9UPQ7 1066 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 NRXN2Q9P2S2 1712 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 RNF123Q5XPI4 1314 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 SH3TC1Q8TE82 1336 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 KIF16BQ96L93 1317 aa24.34■■□□□ 1.49
HLA-DRB1-201ENST00000360004 SRCAPQ6ZRS2 3230 aa24.33■■□□□ 1.49
HLA-DRB1-201ENST00000360004 RTL5Q5HYW3 569 aaPredicted RBP24.33■■□□□ 1.49
HLA-DRB1-201ENST00000360004 CHRNA5P30532 468 aa24.32■■□□□ 1.48
HLA-DRB1-201ENST00000360004 TRIM28Q13263 835 aaKnown RBP24.32■■□□□ 1.48
HLA-DRB1-201ENST00000360004 GPR162Q16538 588 aa24.32■■□□□ 1.48
HLA-DRB1-201ENST00000360004 FRAT1Q92837 279 aaPredicted RBP24.32■■□□□ 1.48
HLA-DRB1-201ENST00000360004 NOB1Q9ULX3 412 aaKnown RBP24.32■■□□□ 1.48
HLA-DRB1-201ENST00000360004 CWF19L2Q2TBE0 894 aaKnown RBP24.31■■□□□ 1.48
HLA-DRB1-201ENST00000360004 ZNF622Q969S3 477 aaKnown RBP eCLIP24.31■■□□□ 1.48
HLA-DRB1-201ENST00000360004 PXDNLA1KZ92 1463 aa24.31■■□□□ 1.48
HLA-DRB1-201ENST00000360004 IPO8O15397 1037 aaKnown RBP24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 HSP90B1P14625 803 aaKnown RBP24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 LINS1Q8NG48 757 aa24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 FAM89AQ96GI7 184 aa24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 API5Q9BZZ5 524 aaKnown RBP24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 PIM2Q9P1W9 311 aa24.3■■□□□ 1.48
HLA-DRB1-201ENST00000360004 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
HLA-DRB1-201ENST00000360004 NEURL1BA8MQ27 555 aa24.29■■□□□ 1.48
HLA-DRB1-201ENST00000360004 RPGRQ92834 1020 aaKnown RBP24.29■■□□□ 1.48
HLA-DRB1-201ENST00000360004 NLRP3Q96P20 1036 aa24.29■■□□□ 1.48
HLA-DRB1-201ENST00000360004 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 BCAR3O75815 825 aa24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 IGKV5-2P06315 115 aa24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 ZBTB38Q8NAP3 1195 aaPredicted RBP24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 SRCIN1Q9C0H9 1055 aa24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 BCS1LQ9Y276 419 aa24.28■■□□□ 1.48
HLA-DRB1-201ENST00000360004 IRS4O14654 1257 aaPredicted RBP24.26■■□□□ 1.47
HLA-DRB1-201ENST00000360004 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
HLA-DRB1-201ENST00000360004 BRPF1P55201 1214 aaPredicted RBP24.26■■□□□ 1.47
HLA-DRB1-201ENST00000360004 DALRD3Q5D0E6 543 aaKnown RBP24.26■■□□□ 1.47
HLA-DRB1-201ENST00000360004 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
HLA-DRB1-201ENST00000360004 NPR1P16066 1061 aa24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 GCKRQ14397 625 aa24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 BEND3Q5T5X7 828 aa24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 SYNE4Q8N205 404 aa24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 JARID2Q92833 1246 aaPredicted RBP24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 C9orf78Q9NZ63 289 aaPredicted RBP24.25■■□□□ 1.47
HLA-DRB1-201ENST00000360004 ALDH1L1O75891 902 aa24.24■■□□□ 1.47
HLA-DRB1-201ENST00000360004 SLC10A5Q5PT55 438 aa24.24■■□□□ 1.47
HLA-DRB1-201ENST00000360004 TTLL6Q8N841 843 aa24.24■■□□□ 1.47
HLA-DRB1-201ENST00000360004 SRGNP10124 158 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 ZKSCAN2Q63HK3 967 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 UBE3BQ7Z3V4 1068 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 CNKSR1Q969H4 720 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 RBM17Q96I25 401 aaKnown RBP24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 RCAN3Q9UKA8 241 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 ANKRD31Q8N7Z5 1873 aa24.23■■□□□ 1.47
HLA-DRB1-201ENST00000360004 RIC1Q4ADV7 1423 aa24.22■■□□□ 1.47
HLA-DRB1-201ENST00000360004 ARHGAP45Q92619 1136 aa24.22■■□□□ 1.47
HLA-DRB1-201ENST00000360004 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
HLA-DRB1-201ENST00000360004 KCNA3P22001 575 aa24.2■■□□□ 1.46
HLA-DRB1-201ENST00000360004 ALDH1B1P30837 517 aa24.2■■□□□ 1.46
HLA-DRB1-201ENST00000360004 ATF7IPQ6VMQ6 1270 aa24.2■■□□□ 1.46
HLA-DRB1-201ENST00000360004 FTSJ3Q8IY81 847 aaKnown RBP24.2■■□□□ 1.46
HLA-DRB1-201ENST00000360004 ZNF219Q9P2Y4 722 aaPredicted RBP24.2■■□□□ 1.46
HLA-DRB1-201ENST00000360004 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 TNRC6CQ9HCJ0 1690 aaKnown RBP24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 KLRG2A4D1S0 409 aaPredicted RBP24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 GRIN3BO60391 1043 aa24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 PDE8AO60658 829 aa24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
HLA-DRB1-201ENST00000360004 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 H7C1W4 665 aa24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 GRM8O00222 908 aa24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 C3orf67Q6ZVT6 689 aa24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 CLUAP1Q96AJ1 413 aa24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 TMX4Q9H1E5 349 aaPredicted RBP24.18■■□□□ 1.46
HLA-DRB1-201ENST00000360004 YBX3P16989 372 aaKnown RBP eCLIP24.17■■□□□ 1.46
HLA-DRB1-201ENST00000360004 CRY2Q49AN0 593 aa24.17■■□□□ 1.46
HLA-DRB1-201ENST00000360004 COL11A2P13942 1736 aaPredicted RBP24.17■■□□□ 1.46
HLA-DRB1-201ENST00000360004 TRIM27P14373 513 aa24.16■■□□□ 1.46
HLA-DRB1-201ENST00000360004 CCDC152Q4G0S7 254 aa24.16■■□□□ 1.46
HLA-DRB1-201ENST00000360004 PRPF40BQ6NWY9 871 aaKnown RBP24.16■■□□□ 1.46
HLA-DRB1-201ENST00000360004 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.15■■□□□ 1.46
HLA-DRB1-201ENST00000360004 CCDC85AQ96PX6 553 aaPredicted RBP24.15■■□□□ 1.46
HLA-DRB1-201ENST00000360004 DLEC1Q9Y238 1755 aa24.14■■□□□ 1.46
HLA-DRB1-201ENST00000360004 ARHGAP27Q6ZUM4 889 aa24.14■■□□□ 1.45
HLA-DRB1-201ENST00000360004 CRAMP1Q96RY5 1269 aa24.14■■□□□ 1.45
HLA-DRB1-201ENST00000360004 CHMP3Q9Y3E7 222 aa24.14■■□□□ 1.45
HLA-DRB1-201ENST00000360004 C21orf2O43822 256 aa24.13■■□□□ 1.45
HLA-DRB1-201ENST00000360004 MS4A1P11836 297 aa24.13■■□□□ 1.45
HLA-DRB1-201ENST00000360004 HOXA10P31260 410 aaPredicted RBP24.13■■□□□ 1.45
HLA-DRB1-201ENST00000360004 CTSWP56202 376 aa24.13■■□□□ 1.45
HLA-DRB1-201ENST00000360004 SF3B3Q15393 1217 aaKnown RBP24.13■■□□□ 1.45
HLA-DRB1-201ENST00000360004 ABCC4O15439 1325 aa24.12■■□□□ 1.45
HLA-DRB1-201ENST00000360004 SOGA3Q5TF21 947 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms