RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 DIAPH3Q9NSV4 1193 aa22.2■■□□□ 1.14
PDLIM7-203ENST00000359895 RAD50Q92878 1312 aa22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 NUTM2BA6NNL0 878 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 NUTM2EB1AL46 878 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 PTMSP20962 102 aa22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 HSPA4P34932 840 aa22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 NUTM2AQ8IVF1 878 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 SIL1Q9H173 461 aa22.19■■□□□ 1.14
PDLIM7-203ENST00000359895 NEK4P51957 841 aa22.18■■□□□ 1.14
PDLIM7-203ENST00000359895 PTPN12Q05209 780 aaKnown RBP22.18■■□□□ 1.14
PDLIM7-203ENST00000359895 PIGBQ92521 554 aa22.17■■□□□ 1.14
PDLIM7-203ENST00000359895 TNPO1Q92973 898 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-203ENST00000359895 FOXD4L1Q9NU39 408 aa22.17■■□□□ 1.14
PDLIM7-203ENST00000359895 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
PDLIM7-203ENST00000359895 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
PDLIM7-203ENST00000359895 NUCB2P80303 420 aa22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 CDCA7Q9BWT1 371 aaPredicted RBP22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 CCDC8Q9H0W5 538 aaPredicted RBP22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 EXOC5O00471 708 aa22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 STARD3NLO95772 234 aa22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 KLHDC4Q8TBB5 520 aa22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 LSG1Q9H089 658 aaKnown RBP22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
PDLIM7-203ENST00000359895 BCL9O00512 1426 aa22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 FOXO4P98177 505 aa22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 JARID2Q92833 1246 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 IL25Q9H293 177 aa22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 ZBTB3Q9H5J0 574 aa22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
PDLIM7-203ENST00000359895 LMBR1LQ6UX01 489 aa22.14■■□□□ 1.13
PDLIM7-203ENST00000359895 CWC27Q6UX04 472 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-203ENST00000359895 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
PDLIM7-203ENST00000359895 ANKRD36CQ5JPF3 1778 aa22.14■■□□□ 1.13
PDLIM7-203ENST00000359895 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 TNNI3KQ59H18 835 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 CLEC17AQ6ZS10 378 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 ISCA1Q9BUE6 129 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 FPGT-TNNI3KV9GXZ4 949 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 DOT1LQ8TEK3 1739 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
PDLIM7-203ENST00000359895 TRIM28Q13263 835 aaKnown RBP22.12■■□□□ 1.13
PDLIM7-203ENST00000359895 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
PDLIM7-203ENST00000359895 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
PDLIM7-203ENST00000359895 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
PDLIM7-203ENST00000359895 NWD2Q9ULI1 1742 aa22.11■■□□□ 1.13
PDLIM7-203ENST00000359895 ADAMTS2O95450 1211 aa22.11■■□□□ 1.13
PDLIM7-203ENST00000359895 ATP5JP18859 108 aa22.11■■□□□ 1.13
PDLIM7-203ENST00000359895 TFCP2Q12800 502 aa22.11■■□□□ 1.13
PDLIM7-203ENST00000359895 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-203ENST00000359895 GPR108Q9NPR9 543 aa22.1■■□□□ 1.13
PDLIM7-203ENST00000359895 TMX3Q96JJ7 454 aa22.09■■□□□ 1.13
PDLIM7-203ENST00000359895 SNRKQ9NRH2 765 aa22.09■■□□□ 1.13
PDLIM7-203ENST00000359895 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
PDLIM7-203ENST00000359895 RFX7Q2KHR2 1363 aa22.09■■□□□ 1.13
PDLIM7-203ENST00000359895 GOLGA6L22H0YM25 854 aa22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 TRAK2O60296 914 aa22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 CUL4AQ13619 759 aa22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 INTS4Q96HW7 963 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 BOLA2Q9H3K6 86 aa22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 SNX14Q9Y5W7 946 aa22.08■■□□□ 1.13
PDLIM7-203ENST00000359895 SSFA2P28290 1259 aa22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 SKOR2Q2VWA4 1001 aaPredicted RBP22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 FSD1Q9BTV5 496 aa22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 DBNLQ9UJU6 430 aaKnown RBP22.08■■□□□ 1.12
PDLIM7-203ENST00000359895 MAP3K15Q6ZN16 1313 aa22.07■■□□□ 1.12
PDLIM7-203ENST00000359895 CIAO1O76071 339 aa22.07■■□□□ 1.12
PDLIM7-203ENST00000359895 CYP2E1P05181 493 aaPredicted RBP22.07■■□□□ 1.12
PDLIM7-203ENST00000359895 HSP90AB3PQ58FF7 597 aa22.07■■□□□ 1.12
PDLIM7-203ENST00000359895 KCNB2Q92953 911 aa22.07■■□□□ 1.12
PDLIM7-203ENST00000359895 NUP98P52948 1817 aa22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 CCDC171Q6TFL3 1326 aa22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 PCCAP05165 728 aaPredicted RBP22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 MYH3P11055 1940 aa22.06■■□□□ 1.12
PDLIM7-203ENST00000359895 NMIQ13287 307 aaPredicted RBP22.05■■□□□ 1.12
PDLIM7-203ENST00000359895 GIGYF2Q6Y7W6 1299 aaKnown RBP22.05■■□□□ 1.12
PDLIM7-203ENST00000359895 TICAM2Q86XR7 235 aa22.05■■□□□ 1.12
PDLIM7-203ENST00000359895 PLA2G12BQ9BX93 195 aa22.05■■□□□ 1.12
PDLIM7-203ENST00000359895 ZNF330Q9Y3S2 320 aaPredicted RBP22.05■■□□□ 1.12
PDLIM7-203ENST00000359895 EYA2O00167 538 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 SOCS7O14512 581 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 CYP19A1P11511 503 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 ATG9AQ7Z3C6 839 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 C8orf37Q96NL8 207 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 SPEF2Q9C093 1822 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 ZGPATQ8N5A5 531 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 UPF3BQ9BZI7 483 aaKnown RBP22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 TM6SF1Q9BZW5 370 aa22.04■■□□□ 1.12
PDLIM7-203ENST00000359895 CICQ96RK0 1608 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 PTH1RQ03431 593 aa22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 ZBTB38Q8NAP3 1195 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 HAUS7Q99871 368 aa22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 DBNDD2Q9BQY9 259 aa22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
PDLIM7-203ENST00000359895 MED23Q9ULK4 1368 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms