RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 WWC1Q8IX03 1113 aa26.53■■□□□ 1.84
PPP1CA-202ENST00000358239 KDM2BQ8NHM5 1336 aa26.52■■□□□ 1.84
PPP1CA-202ENST00000358239 IL16Q14005 1332 aa26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 TCIRG1Q13488 830 aa26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 PLBD2Q8NHP8 589 aa26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 UTP14AQ9BVJ6 771 aaKnown RBP26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 TAOK3Q9H2K8 898 aa26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 ZNF219Q9P2Y4 722 aaPredicted RBP26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 DDX60Q8IY21 1712 aaKnown RBP26.51■■□□□ 1.83
PPP1CA-202ENST00000358239 CCDC93Q567U6 631 aa26.49■■□□□ 1.83
PPP1CA-202ENST00000358239 ANKRD13DQ6ZTN6 518 aa26.49■■□□□ 1.83
PPP1CA-202ENST00000358239 C7orf43Q8WVR3 580 aa26.49■■□□□ 1.83
PPP1CA-202ENST00000358239 RPGRQ92834 1020 aaKnown RBP26.49■■□□□ 1.83
PPP1CA-202ENST00000358239 KIF3CO14782 793 aa26.48■■□□□ 1.83
PPP1CA-202ENST00000358239 ELL2O00472 640 aaPredicted RBP26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 HOXA10P31260 410 aaPredicted RBP26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 PRELPP51888 382 aa26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 SLC10A5Q5PT55 438 aa26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 NLRP10Q86W26 655 aa26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 C8orf58Q8NAV2 365 aa26.47■■□□□ 1.83
PPP1CA-202ENST00000358239 CCDC30Q5VVM6 783 aa26.46■■□□□ 1.83
PPP1CA-202ENST00000358239 NLRP3Q96P20 1036 aa26.46■■□□□ 1.83
PPP1CA-202ENST00000358239 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
PPP1CA-202ENST00000358239 GOLGA2Q08379 1002 aa26.44■■□□□ 1.82
PPP1CA-202ENST00000358239 TSR2Q969E8 191 aaKnown RBP26.44■■□□□ 1.82
PPP1CA-202ENST00000358239 RBM17Q96I25 401 aaKnown RBP26.44■■□□□ 1.82
PPP1CA-202ENST00000358239 CRAMP1Q96RY5 1269 aa26.44■■□□□ 1.82
PPP1CA-202ENST00000358239 SH3TC1Q8TE82 1336 aa26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 WDR90Q96KV7 1748 aa26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 CC2D2BQ6DHV5 1058 aa26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 WDR63Q8IWG1 891 aa26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 NMRK2Q9NPI5 230 aa26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 TRMT112Q9UI30 125 aaKnown RBP26.43■■□□□ 1.82
PPP1CA-202ENST00000358239 TAF1P21675 1872 aa26.42■■□□□ 1.82
PPP1CA-202ENST00000358239 GRIPAP1Q4V328 841 aa26.42■■□□□ 1.82
PPP1CA-202ENST00000358239 FAM9BQ8IZU0 186 aa26.42■■□□□ 1.82
PPP1CA-202ENST00000358239 ISCA1Q9BUE6 129 aa26.42■■□□□ 1.82
PPP1CA-202ENST00000358239 GLTPD2A6NH11 291 aa26.41■■□□□ 1.82
PPP1CA-202ENST00000358239 TOMM70O94826 608 aa26.41■■□□□ 1.82
PPP1CA-202ENST00000358239 FKBP4Q02790 459 aaKnown RBP eCLIP26.41■■□□□ 1.82
PPP1CA-202ENST00000358239 MYH3P11055 1940 aa26.4■■□□□ 1.82
PPP1CA-202ENST00000358239 SENP3-EIF4A1A0A087X0R7 540 aa26.4■■□□□ 1.82
PPP1CA-202ENST00000358239 TRIM28Q13263 835 aaKnown RBP26.4■■□□□ 1.82
PPP1CA-202ENST00000358239 RIC3Q7Z5B4 369 aa26.4■■□□□ 1.82
PPP1CA-202ENST00000358239 TSPYL6Q8N831 410 aa26.4■■□□□ 1.82
PPP1CA-202ENST00000358239 SNED1Q8TER0 1413 aa26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 DDX58O95786 925 aaKnown RBP26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 TWISTNBQ3B726 338 aaPredicted RBP26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 DPY19L2Q6NUT2 758 aa26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 STK31Q9BXU1 1019 aa26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 PHAXQ9H814 394 aaKnown RBP26.39■■□□□ 1.82
PPP1CA-202ENST00000358239 SCN4AP35499 1836 aa26.39■■□□□ 1.81
PPP1CA-202ENST00000358239 C16orf71Q8IYS4 520 aaPredicted RBP26.38■■□□□ 1.81
PPP1CA-202ENST00000358239 FANCIQ9NVI1 1328 aa26.38■■□□□ 1.81
PPP1CA-202ENST00000358239 C3orf67Q6ZVT6 689 aa26.37■■□□□ 1.81
PPP1CA-202ENST00000358239 PSMD1Q99460 953 aa26.37■■□□□ 1.81
PPP1CA-202ENST00000358239 PPEF1O14829 653 aaPredicted RBP26.36■■□□□ 1.81
PPP1CA-202ENST00000358239 TMX4Q9H1E5 349 aaPredicted RBP26.36■■□□□ 1.81
PPP1CA-202ENST00000358239 LRRC37AA6NMS7 1700 aa26.36■■□□□ 1.81
PPP1CA-202ENST00000358239 ATP5J2-PTCD1G3V325 749 aa26.35■■□□□ 1.81
PPP1CA-202ENST00000358239 OLFM4Q6UX06 510 aa26.35■■□□□ 1.81
PPP1CA-202ENST00000358239 RRAGCQ9HB90 399 aa26.35■■□□□ 1.81
PPP1CA-202ENST00000358239 SALL2Q9Y467 1007 aaPredicted RBP26.35■■□□□ 1.81
PPP1CA-202ENST00000358239 HCLS1P14317 486 aaPredicted RBP26.34■■□□□ 1.81
PPP1CA-202ENST00000358239 RBM46Q8TBY0 533 aaKnown RBP26.34■■□□□ 1.81
PPP1CA-202ENST00000358239 ABCC4O15439 1325 aa26.34■■□□□ 1.81
PPP1CA-202ENST00000358239 HSP90B1P14625 803 aaKnown RBP26.33■■□□□ 1.81
PPP1CA-202ENST00000358239 CEP350Q5VT06 3117 aa26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 BBOX1O75936 387 aa26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 VEGFAP15692 232 aaPredicted RBP26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 DDX46Q7L014 1031 aaKnown RBP26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 SYNE4Q8N205 404 aa26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 FAM89AQ96GI7 184 aa26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 ZNF277Q9NRM2 450 aaPredicted RBP26.32■■□□□ 1.8
PPP1CA-202ENST00000358239 HSPA6P17066 643 aa26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 IARSP41252 1262 aaKnown RBP26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 CCDC191Q8NCU4 936 aa26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 METTL22Q9BUU2 404 aaPredicted RBP26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 MYH16Q9H6N6 1097 aa26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 ATP6V0A2Q9Y487 856 aa26.31■■□□□ 1.8
PPP1CA-202ENST00000358239 KSR2Q6VAB6 950 aa26.3■■□□□ 1.8
PPP1CA-202ENST00000358239 ZBTB38Q8NAP3 1195 aaPredicted RBP26.3■■□□□ 1.8
PPP1CA-202ENST00000358239 MYD88Q99836 296 aa26.3■■□□□ 1.8
PPP1CA-202ENST00000358239 TMC4Q7Z404 712 aa26.29■■□□□ 1.8
PPP1CA-202ENST00000358239 SLC4A2P04920 1241 aa26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 FSTL1Q12841 308 aa26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 GRAPQ13588 217 aa26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 SF3B3Q15393 1217 aaKnown RBP26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 GRAPLQ8TC17 118 aaPredicted RBP26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 CWC25Q9NXE8 425 aaPredicted RBP26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 MAP3K2Q9Y2U5 619 aa26.28■■□□□ 1.8
PPP1CA-202ENST00000358239 IRS4O14654 1257 aaPredicted RBP26.27■■□□□ 1.8
PPP1CA-202ENST00000358239 SP8Q8IXZ3 490 aa26.27■■□□□ 1.8
PPP1CA-202ENST00000358239 JDP2Q8WYK2 163 aa26.27■■□□□ 1.8
PPP1CA-202ENST00000358239 PI4KAP2A4QPH2 592 aa26.26■■□□□ 1.79
PPP1CA-202ENST00000358239 EXOSC9Q06265 439 aaKnown RBP26.26■■□□□ 1.79
PPP1CA-202ENST00000358239 NEXNQ0ZGT2 675 aa26.26■■□□□ 1.79
PPP1CA-202ENST00000358239 PI4KAP1Q8N8J0 262 aa26.26■■□□□ 1.79
PPP1CA-202ENST00000358239 VPS33BQ9H267 617 aa26.26■■□□□ 1.79
PPP1CA-202ENST00000358239 TCERG1O14776 1098 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms