RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
FAM3B-201ENST00000357985 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
FAM3B-201ENST00000357985 JDP2Q8WYK2 163 aa17.58■□□□□ 0.4
FAM3B-201ENST00000357985 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
FAM3B-201ENST00000357985 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
FAM3B-201ENST00000357985 TNS4Q8IZW8 715 aa17.57■□□□□ 0.4
FAM3B-201ENST00000357985 MKRN1Q9UHC7 482 aaKnown RBP17.57■□□□□ 0.4
FAM3B-201ENST00000357985 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
FAM3B-201ENST00000357985 COL4A5P29400 1685 aa17.57■□□□□ 0.4
FAM3B-201ENST00000357985 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 CNTNAP1P78357 1384 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 FZD9O00144 591 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 NTSR2O95665 410 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 EPHX2P34913 555 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 RALBP1Q15311 655 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 GPC2Q8N158 579 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
FAM3B-201ENST00000357985 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
FAM3B-201ENST00000357985 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
FAM3B-201ENST00000357985 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
FAM3B-201ENST00000357985 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
FAM3B-201ENST00000357985 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
FAM3B-201ENST00000357985 ZNF34Q8IZ26 560 aa17.55■□□□□ 0.4
FAM3B-201ENST00000357985 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
FAM3B-201ENST00000357985 RIPK4P57078 832 aa17.54■□□□□ 0.4
FAM3B-201ENST00000357985 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
FAM3B-201ENST00000357985 LRRC37AA6NMS7 1700 aa17.53■□□□□ 0.4
FAM3B-201ENST00000357985 DDX60Q8IY21 1712 aaKnown RBP17.53■□□□□ 0.4
FAM3B-201ENST00000357985 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
FAM3B-201ENST00000357985 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
FAM3B-201ENST00000357985 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
FAM3B-201ENST00000357985 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.4
FAM3B-201ENST00000357985 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.4
FAM3B-201ENST00000357985 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
FAM3B-201ENST00000357985 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
FAM3B-201ENST00000357985 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
FAM3B-201ENST00000357985 THSD7BQ9C0I4 1608 aa17.51■□□□□ 0.39
FAM3B-201ENST00000357985 TMPOP42166 694 aaKnown RBP17.51■□□□□ 0.39
FAM3B-201ENST00000357985 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
FAM3B-201ENST00000357985 NIM1KQ8IY84 436 aa17.51■□□□□ 0.39
FAM3B-201ENST00000357985 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
FAM3B-201ENST00000357985 GJA3Q9Y6H8 435 aa17.51■□□□□ 0.39
FAM3B-201ENST00000357985 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
FAM3B-201ENST00000357985 PDIA6Q15084 440 aa17.5■□□□□ 0.39
FAM3B-201ENST00000357985 TAF1P21675 1872 aa17.5■□□□□ 0.39
FAM3B-201ENST00000357985 PCNTO95613 3336 aa17.49■□□□□ 0.39
FAM3B-201ENST00000357985 ANXA1P04083 346 aa17.49■□□□□ 0.39
FAM3B-201ENST00000357985 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
FAM3B-201ENST00000357985 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
FAM3B-201ENST00000357985 ABCC4O15439 1325 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
FAM3B-201ENST00000357985 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 CAPN15O75808 1086 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 AIDAQ96BJ3 306 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
FAM3B-201ENST00000357985 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
FAM3B-201ENST00000357985 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
FAM3B-201ENST00000357985 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
FAM3B-201ENST00000357985 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
FAM3B-201ENST00000357985 SCNN1DP51172 638 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
FAM3B-201ENST00000357985 AOC3Q16853 763 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
FAM3B-201ENST00000357985 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
FAM3B-201ENST00000357985 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 VEGFBP49765 207 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
FAM3B-201ENST00000357985 FOXN1O15353 648 aa17.44■□□□□ 0.38
FAM3B-201ENST00000357985 HOXB7P09629 217 aa17.44■□□□□ 0.38
FAM3B-201ENST00000357985 USP50Q70EL3 339 aaPredicted RBP17.44■□□□□ 0.38
FAM3B-201ENST00000357985 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
FAM3B-201ENST00000357985 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
FAM3B-201ENST00000357985 CHL1O00533 1208 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 BBOX1O75936 387 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 TCIRG1Q13488 830 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
FAM3B-201ENST00000357985 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
FAM3B-201ENST00000357985 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
FAM3B-201ENST00000357985 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
FAM3B-201ENST00000357985 CDHR2Q9BYE9 1310 aa17.43■□□□□ 0.38
FAM3B-201ENST00000357985 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
FAM3B-201ENST00000357985 EPS15P42566 896 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 CTCFP49711 727 aaPredicted RBP17.42■□□□□ 0.38
FAM3B-201ENST00000357985 GRAPQ13588 217 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms