RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 FOXN1O15353 648 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 VEGFBP49765 207 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 PSMD1Q99460 953 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 HOXA10P31260 410 aaPredicted RBP11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 EPHX2P34913 555 aa11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 PNMA8AQ86V59 439 aaPredicted RBP11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 GPC2Q8N158 579 aa11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
COL4A3BP-202ENST00000357457 RASSF10A6NK89 507 aa11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 CTCFP49711 727 aaPredicted RBP11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 EAPPQ56P03 285 aaPredicted RBP11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
COL4A3BP-202ENST00000357457 DLG5Q8TDM6 1919 aa11.41□□□□□ -0.58
COL4A3BP-202ENST00000357457 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
COL4A3BP-202ENST00000357457 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
COL4A3BP-202ENST00000357457 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
COL4A3BP-202ENST00000357457 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
COL4A3BP-202ENST00000357457 RNF123Q5XPI4 1314 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 EIF4A1P60842 406 aaKnown RBP11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 LAMB4A4D0S4 1761 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 RIC1Q4ADV7 1423 aa11.4□□□□□ -0.58
COL4A3BP-202ENST00000357457 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 ZNF34Q8IZ26 560 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 PLEKHF1Q96S99 279 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
COL4A3BP-202ENST00000357457 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 NGEFQ8N5V2 710 aa11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 COL4A5P29400 1685 aa11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
COL4A3BP-202ENST00000357457 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 SCNN1DP51172 638 aa11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 LBX1P52954 281 aa11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 MAP2K1Q02750 393 aaPredicted RBP11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 RRP7AQ9Y3A4 280 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 TRPM7Q96QT4 1865 aa11.37□□□□□ -0.59
COL4A3BP-202ENST00000357457 NTSR2O95665 410 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 HSPA8P11142 646 aaKnown RBP11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 EPS15P42566 896 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 SLC10A5Q5PT55 438 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 KIF6Q6ZMV9 814 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 USP50Q70EL3 339 aaPredicted RBP11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
COL4A3BP-202ENST00000357457 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 NEFMP07197 916 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 MYL6BP14649 208 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 GPTP24298 496 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 CST9Q5W186 159 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
COL4A3BP-202ENST00000357457 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 FMR1Q06787 632 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 PDIA6Q15084 440 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 RTFDC1Q9BY42 306 aaPredicted RBP11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 ABT1Q9ULW3 272 aaKnown RBP11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
COL4A3BP-202ENST00000357457 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 THUMPD2Q9BTF0 503 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 PNNQ9H307 717 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
COL4A3BP-202ENST00000357457 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 BBOX1O75936 387 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 ECE1P42892 770 aa11.32□□□□□ -0.6
COL4A3BP-202ENST00000357457 CXCL9Q07325 125 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms