RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 XAGE3Q8WTP9 111 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 MYD88Q99836 296 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 F13A1P00488 732 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 NECTIN1Q15223 517 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 NLRP2Q9NX02 1062 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 MTMR6Q9Y217 621 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 OFD1O75665 1012 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 TSC1Q92574 1164 aa18.29■□□□□ 0.52
PTBP1-203ENST00000356948 TTC12Q9H892 705 aaPredicted RBP18.29■□□□□ 0.52
PTBP1-203ENST00000356948 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-203ENST00000356948 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
PTBP1-203ENST00000356948 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
PTBP1-203ENST00000356948 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
PTBP1-203ENST00000356948 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
PTBP1-203ENST00000356948 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-203ENST00000356948 MED1Q15648 1581 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-203ENST00000356948 CAMK4Q16566 473 aa18.27■□□□□ 0.52
PTBP1-203ENST00000356948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■■□□ 15.4
PTBP1-203ENST00000356948 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
PTBP1-203ENST00000356948 ZKSCAN5Q9Y2L8 839 aa18.27■□□□□ 0.52
PTBP1-203ENST00000356948 A0A0G2JLW4 131 aa18.27■□□□□ 0.51
PTBP1-203ENST00000356948 FOSBP53539 338 aa18.27■□□□□ 0.51
PTBP1-203ENST00000356948 MTX1Q13505 466 aa18.27■□□□□ 0.51
PTBP1-203ENST00000356948 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.51
PTBP1-203ENST00000356948 FSD1Q9BTV5 496 aa18.27■□□□□ 0.51
PTBP1-203ENST00000356948 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.51
PTBP1-203ENST00000356948 COL15A1P39059 1388 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.512e-9■□□□□ 9.4
PTBP1-203ENST00000356948 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 SLC27A2O14975 620 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
PTBP1-203ENST00000356948 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
PTBP1-203ENST00000356948 LINS1Q8NG48 757 aa18.25■□□□□ 0.51
PTBP1-203ENST00000356948 UQCRHLA0A096LP55 91 aa18.25■□□□□ 0.51
PTBP1-203ENST00000356948 UQCRHP07919 91 aa18.25■□□□□ 0.51
PTBP1-203ENST00000356948 HOXB7P09629 217 aa18.25■□□□□ 0.51
PTBP1-203ENST00000356948 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
PTBP1-203ENST00000356948 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
PTBP1-203ENST00000356948 NEURL1BA8MQ27 555 aa18.24■□□□□ 0.51
PTBP1-203ENST00000356948 UBE3BQ7Z3V4 1068 aa18.24■□□□□ 0.51
PTBP1-203ENST00000356948 JAK2O60674 1132 aa18.24■□□□□ 0.51
PTBP1-203ENST00000356948 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
PTBP1-203ENST00000356948 EVI5LQ96CN4 794 aa18.24■□□□□ 0.51
PTBP1-203ENST00000356948 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTBP1-203ENST00000356948 TFCP2Q12800 502 aa18.23■□□□□ 0.51
PTBP1-203ENST00000356948 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
PTBP1-203ENST00000356948 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
PTBP1-203ENST00000356948 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
PTBP1-203ENST00000356948 ADCY5O95622 1261 aa18.23■□□□□ 0.51
PTBP1-203ENST00000356948 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
PTBP1-203ENST00000356948 MAP4K1Q92918 833 aa18.23■□□□□ 0.51
PTBP1-203ENST00000356948 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
PTBP1-203ENST00000356948 LIG1P18858 919 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.22■□□□□ 0.51
PTBP1-203ENST00000356948 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 GCKRQ14397 625 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 VPS53Q5VIR6 699 aa18.22■□□□□ 0.51
PTBP1-203ENST00000356948 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.22■□□□□ 0.51
PTBP1-203ENST00000356948 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
PTBP1-203ENST00000356948 TOB2Q14106 344 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-203ENST00000356948 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
PTBP1-203ENST00000356948 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
PTBP1-203ENST00000356948 ERBB3P21860 1342 aa18.21■□□□□ 0.51
PTBP1-203ENST00000356948 CCDC183Q5T5S1 534 aa18.21■□□□□ 0.51
PTBP1-203ENST00000356948 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.51
PTBP1-203ENST00000356948 SPC24Q8NBT2 197 aa18.21■□□□□ 0.51
PTBP1-203ENST00000356948 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
PTBP1-203ENST00000356948 A0A087WWV3 80 aa18.2■□□□□ 0.5
PTBP1-203ENST00000356948 ZNF500O60304 480 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-203ENST00000356948 UBE2HP62256 183 aa18.2■□□□□ 0.5
PTBP1-203ENST00000356948 RUFY2Q8WXA3 655 aa18.2■□□□□ 0.5
PTBP1-203ENST00000356948 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-203ENST00000356948 CEBPZQ03701 1054 aaKnown RBP18.19■□□□□ 0.5
PTBP1-203ENST00000356948 NPHP4O75161 1426 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-203ENST00000356948 CYP27B1O15528 508 aa18.19■□□□□ 0.5
PTBP1-203ENST00000356948 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
PTBP1-203ENST00000356948 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-203ENST00000356948 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
PTBP1-203ENST00000356948 IGSF3O75054 1194 aa18.19■□□□□ 0.5
PTBP1-203ENST00000356948 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-203ENST00000356948 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTBP1-203ENST00000356948 PTPN12Q05209 780 aaKnown RBP18.18■□□□□ 0.5
PTBP1-203ENST00000356948 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 TMEM87AQ8NBN3 555 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-203ENST00000356948 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 CHD2O14647 1828 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms