RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CYP46A1Q9Y6A2 500 aa21.19■□□□□ 0.98
GYPC-202ENST00000356887 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
GYPC-202ENST00000356887 G3BP1Q13283 466 aaKnown RBP eCLIP21.19■□□□□ 0.98
GYPC-202ENST00000356887 CCDC183Q5T5S1 534 aa21.19■□□□□ 0.98
GYPC-202ENST00000356887 EAF2Q96CJ1 260 aaPredicted RBP21.19■□□□□ 0.98
GYPC-202ENST00000356887 SH2B1Q9NRF2 756 aaPredicted RBP21.19■□□□□ 0.98
GYPC-202ENST00000356887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.19■□□□□ 0.98
GYPC-202ENST00000356887 UBE2HP62256 183 aa21.18■□□□□ 0.98
GYPC-202ENST00000356887 SNRKQ9NRH2 765 aa21.18■□□□□ 0.98
GYPC-202ENST00000356887 ATP6V1DQ9Y5K8 247 aa21.18■□□□□ 0.98
GYPC-202ENST00000356887 HIP1O00291 1037 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 CCDC83Q8IWF9 413 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 LETM1O95202 739 aaPredicted RBP21.17■□□□□ 0.98
GYPC-202ENST00000356887 GJB2P29033 226 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 TERF1P54274 439 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 UVSSAQ2YD98 709 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 MAP4K1Q92918 833 aa21.17■□□□□ 0.98
GYPC-202ENST00000356887 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
GYPC-202ENST00000356887 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 MTMR6Q9Y217 621 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 RBM8AQ9Y5S9 174 aaKnown RBP21.16■□□□□ 0.98
GYPC-202ENST00000356887 IGKV5-2P06315 115 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 FGD1P98174 961 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 ST3GAL1Q11201 340 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 NMIQ13287 307 aaPredicted RBP21.16■□□□□ 0.98
GYPC-202ENST00000356887 CREB3L3Q68CJ9 461 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 FAM227BQ96M60 508 aa21.16■□□□□ 0.98
GYPC-202ENST00000356887 CCDC8Q9H0W5 538 aaPredicted RBP21.16■□□□□ 0.98
GYPC-202ENST00000356887 ZKSCAN1P17029 563 aaPredicted RBP21.15■□□□□ 0.98
GYPC-202ENST00000356887 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
GYPC-202ENST00000356887 LARP1Q6PKG0 1096 aaKnown RBP21.14■□□□□ 0.98
GYPC-202ENST00000356887 ME3Q16798 604 aa21.14■□□□□ 0.97
GYPC-202ENST00000356887 KRT28Q7Z3Y7 464 aa21.14■□□□□ 0.97
GYPC-202ENST00000356887 DDX17Q92841 729 aaKnown RBP21.14■□□□□ 0.97
GYPC-202ENST00000356887 RIC3Q7Z5B4 369 aa21.13■□□□□ 0.97
GYPC-202ENST00000356887 TLR7Q9NYK1 1049 aaKnown RBP21.13■□□□□ 0.97
GYPC-202ENST00000356887 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
GYPC-202ENST00000356887 KLHL34Q8N239 644 aa21.13■□□□□ 0.97
GYPC-202ENST00000356887 SLC27A2O14975 620 aa21.12■□□□□ 0.97
GYPC-202ENST00000356887 HSP90AA2PQ14568 343 aaPredicted RBP21.12■□□□□ 0.97
GYPC-202ENST00000356887 CSPP1Q1MSJ5 1256 aa21.12■□□□□ 0.97
GYPC-202ENST00000356887 LTBP4Q8N2S1 1624 aa21.12■□□□□ 0.97
GYPC-202ENST00000356887 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 FIBPO43427 364 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
GYPC-202ENST00000356887 BOLA2Q9H3K6 86 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 TPCN1Q9ULQ1 816 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 RGPD5Q99666 1765 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 MRC1P22897 1456 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 PSMA5P28066 241 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 KCNJ4P48050 445 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 DNM1Q05193 864 aaKnown RBP21.11■□□□□ 0.97
GYPC-202ENST00000356887 SLC39A6Q13433 755 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 GCKRQ14397 625 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 SLC52A2Q9HAB3 445 aa21.11■□□□□ 0.97
GYPC-202ENST00000356887 ERBB3P21860 1342 aa21.1■□□□□ 0.97
GYPC-202ENST00000356887 A0A0D9SFI3 127 aa21.1■□□□□ 0.97
GYPC-202ENST00000356887 NECAB1Q8N987 351 aa21.1■□□□□ 0.97
GYPC-202ENST00000356887 SIL1Q9H173 461 aa21.1■□□□□ 0.97
GYPC-202ENST00000356887 NEXNQ0ZGT2 675 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 BRINP3Q76B58 766 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 METTL22Q9BUU2 404 aaPredicted RBP21.09■□□□□ 0.97
GYPC-202ENST00000356887 ALDH8A1Q9H2A2 487 aaPredicted RBP21.09■□□□□ 0.97
GYPC-202ENST00000356887 SLAIN2Q9P270 581 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 C5P01031 1676 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 MED23Q9ULK4 1368 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 DTNBO60941 627 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 EPHA10Q5JZY3 1008 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 KLHDC4Q8TBB5 520 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 XAGE3Q8WTP9 111 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
GYPC-202ENST00000356887 R3HCC1Q9Y3T6 440 aaKnown RBP21.09■□□□□ 0.97
GYPC-202ENST00000356887 NPHP3Q7Z494 1330 aa21.08■□□□□ 0.97
GYPC-202ENST00000356887 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
GYPC-202ENST00000356887 PTMAP06454 111 aaKnown RBP21.08■□□□□ 0.97
GYPC-202ENST00000356887 PDIA4P13667 645 aaKnown RBP21.08■□□□□ 0.97
GYPC-202ENST00000356887 FUCA2Q9BTY2 467 aa21.08■□□□□ 0.97
GYPC-202ENST00000356887 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
GYPC-202ENST00000356887 MYL6BP14649 208 aa21.08■□□□□ 0.96
GYPC-202ENST00000356887 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.96
GYPC-202ENST00000356887 RNF20Q5VTR2 975 aa21.08■□□□□ 0.96
GYPC-202ENST00000356887 COPS6Q7L5N1 327 aa21.08■□□□□ 0.96
GYPC-202ENST00000356887 JCADQ9P266 1359 aa21.08■□□□□ 0.96
GYPC-202ENST00000356887 RAPGEF4Q8WZA2 1011 aa21.07■□□□□ 0.96
GYPC-202ENST00000356887 MYD88Q99836 296 aa21.07■□□□□ 0.96
GYPC-202ENST00000356887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.07■□□□□ 0.96
GYPC-202ENST00000356887 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
GYPC-202ENST00000356887 HCLS1P14317 486 aaPredicted RBP21.06■□□□□ 0.96
GYPC-202ENST00000356887 PHKG2P15735 406 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 PDE4CQ08493 712 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 ANKRD1Q15327 319 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 TSGA10IPQ3SY00 556 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 NFATC2IPQ8NCF5 419 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 COPRSQ9NQ92 184 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 RPS6KB1P23443 525 aa21.06■□□□□ 0.96
GYPC-202ENST00000356887 ZC3H6P61129 1189 aaKnown RBP21.06■□□□□ 0.96
GYPC-202ENST00000356887 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
GYPC-202ENST00000356887 BLOC1S2Q6QNY1 142 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms