RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 ITPRIPQ8IWB1 547 aa30.63■■■□□ 2.49
HMGA2-201ENST00000354636 CWC25Q9NXE8 425 aaPredicted RBP30.63■■■□□ 2.49
HMGA2-201ENST00000354636 SUSD4Q5VX71 490 aa30.61■■■□□ 2.49
HMGA2-201ENST00000354636 COL24A1Q17RW2 1714 aa30.61■■■□□ 2.49
HMGA2-201ENST00000354636 ZBTB7AO95365 584 aa30.59■■■□□ 2.49
HMGA2-201ENST00000354636 USP44Q9H0E7 712 aa30.59■■■□□ 2.49
HMGA2-201ENST00000354636 CARMIL3Q8ND23 1372 aa30.58■■■□□ 2.49
HMGA2-201ENST00000354636 DDX19BQ9UMR2 479 aa30.58■■■□□ 2.49
HMGA2-201ENST00000354636 ZBTB7BO15156 539 aaPredicted RBP30.57■■■□□ 2.49
HMGA2-201ENST00000354636 IRX6P78412 446 aaPredicted RBP30.57■■■□□ 2.49
HMGA2-201ENST00000354636 PPP1R42Q7Z4L9 355 aa30.57■■■□□ 2.49
HMGA2-201ENST00000354636 CRBNQ96SW2 442 aa30.57■■■□□ 2.49
HMGA2-201ENST00000354636 GRM8O00222 908 aa30.57■■■□□ 2.48
HMGA2-201ENST00000354636 DDR1Q08345 913 aa30.57■■■□□ 2.48
HMGA2-201ENST00000354636 UTYO14607 1347 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 FAM177BA6PVY3 158 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 H7C1W4 665 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 POLRMTO00411 1230 aaKnown RBP30.56■■■□□ 2.48
HMGA2-201ENST00000354636 NTSR2O95665 410 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 ZBTB38Q8NAP3 1195 aaPredicted RBP30.56■■■□□ 2.48
HMGA2-201ENST00000354636 MEIS3Q99687 375 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 UTP14AQ9BVJ6 771 aaKnown RBP30.56■■■□□ 2.48
HMGA2-201ENST00000354636 MTFR1LQ9H019 292 aa30.56■■■□□ 2.48
HMGA2-201ENST00000354636 C9orf78Q9NZ63 289 aaPredicted RBP30.56■■■□□ 2.48
HMGA2-201ENST00000354636 MMP10P09238 476 aa30.55■■■□□ 2.48
HMGA2-201ENST00000354636 TRMT112Q9UI30 125 aaKnown RBP30.55■■■□□ 2.48
HMGA2-201ENST00000354636 PCCAP05165 728 aaPredicted RBP30.54■■■□□ 2.48
HMGA2-201ENST00000354636 NBPF7P0C2Y1 421 aaPredicted RBP30.54■■■□□ 2.48
HMGA2-201ENST00000354636 ATF5Q9Y2D1 282 aaPredicted RBP30.54■■■□□ 2.48
HMGA2-201ENST00000354636 SERPINB2P05120 415 aa30.53■■■□□ 2.48
HMGA2-201ENST00000354636 CASP7P55210 303 aa30.53■■■□□ 2.48
HMGA2-201ENST00000354636 FAM89AQ96GI7 184 aa30.53■■■□□ 2.48
HMGA2-201ENST00000354636 NYXQ9GZU5 481 aa30.53■■■□□ 2.48
HMGA2-201ENST00000354636 TPTE2Q6XPS3 522 aa30.52■■■□□ 2.48
HMGA2-201ENST00000354636 NBPF5PQ86XG9 351 aaPredicted RBP30.52■■■□□ 2.48
HMGA2-201ENST00000354636 NPHP1O15259 732 aa30.52■■■□□ 2.48
HMGA2-201ENST00000354636 UBE3BQ7Z3V4 1068 aa30.52■■■□□ 2.48
HMGA2-201ENST00000354636 JARID2Q92833 1246 aaPredicted RBP30.52■■■□□ 2.48
HMGA2-201ENST00000354636 GNAI3P08754 354 aa30.51■■■□□ 2.47
HMGA2-201ENST00000354636 RTL5Q5HYW3 569 aaPredicted RBP30.51■■■□□ 2.47
HMGA2-201ENST00000354636 SYNE4Q8N205 404 aa30.51■■■□□ 2.47
HMGA2-201ENST00000354636 PARP3Q9Y6F1 533 aa30.51■■■□□ 2.47
HMGA2-201ENST00000354636 SH3TC1Q8TE82 1336 aa30.51■■■□□ 2.47
HMGA2-201ENST00000354636 CHMP4BQ9H444 224 aaKnown RBP30.5■■■□□ 2.47
HMGA2-201ENST00000354636 ZBTB40Q9NUA8 1239 aa30.5■■■□□ 2.47
HMGA2-201ENST00000354636 NRXN2Q9P2S2 1712 aa30.5■■■□□ 2.47
HMGA2-201ENST00000354636 UBTFL1P0CB47 393 aaPredicted RBP30.49■■■□□ 2.47
HMGA2-201ENST00000354636 NUTM1Q86Y26 1132 aa30.49■■■□□ 2.47
HMGA2-201ENST00000354636 EXOC6Q8TAG9 804 aa30.49■■■□□ 2.47
HMGA2-201ENST00000354636 CDHR2Q9BYE9 1310 aa30.48■■■□□ 2.47
HMGA2-201ENST00000354636 GTF2E1P29083 439 aaPredicted RBP30.48■■■□□ 2.47
HMGA2-201ENST00000354636 NEFLP07196 543 aa30.47■■■□□ 2.47
HMGA2-201ENST00000354636 ERFEQ4G0M1 354 aa30.47■■■□□ 2.47
HMGA2-201ENST00000354636 PRR5LQ6MZQ0 368 aa30.47■■■□□ 2.47
HMGA2-201ENST00000354636 CNBD1Q8NA66 436 aa30.47■■■□□ 2.47
HMGA2-201ENST00000354636 POLD1P28340 1107 aa30.47■■■□□ 2.47
HMGA2-201ENST00000354636 IRS4O14654 1257 aaPredicted RBP30.45■■■□□ 2.47
HMGA2-201ENST00000354636 SLC10A5Q5PT55 438 aa30.45■■■□□ 2.47
HMGA2-201ENST00000354636 KAZALD1Q96I82 304 aa30.45■■■□□ 2.47
HMGA2-201ENST00000354636 SUCLG2Q96I99 432 aa30.45■■■□□ 2.47
HMGA2-201ENST00000354636 SGIP1Q9BQI5 828 aa30.44■■■□□ 2.46
HMGA2-201ENST00000354636 HDAC5Q9UQL6 1122 aa30.44■■■□□ 2.46
HMGA2-201ENST00000354636 ABCC12Q96J65 1359 aa30.44■■■□□ 2.46
HMGA2-201ENST00000354636 GNAI2P04899 355 aa30.43■■■□□ 2.46
HMGA2-201ENST00000354636 PLA2G12BQ9BX93 195 aa30.43■■■□□ 2.46
HMGA2-201ENST00000354636 CCDC24Q8N4L8 307 aa30.42■■■□□ 2.46
HMGA2-201ENST00000354636 SPON1Q9HCB6 807 aa30.42■■■□□ 2.46
HMGA2-201ENST00000354636 LRRFIP2Q9Y608 721 aaKnown RBP30.42■■■□□ 2.46
HMGA2-201ENST00000354636 DDX60Q8IY21 1712 aaKnown RBP30.42■■■□□ 2.46
HMGA2-201ENST00000354636 HCLS1P14317 486 aaPredicted RBP30.42■■■□□ 2.46
HMGA2-201ENST00000354636 ST5P78524 1137 aa30.42■■■□□ 2.46
HMGA2-201ENST00000354636 AAMPQ13685 434 aa30.42■■■□□ 2.46
HMGA2-201ENST00000354636 LAMB2P55268 1798 aa30.41■■■□□ 2.46
HMGA2-201ENST00000354636 PDE8AO60658 829 aa30.41■■■□□ 2.46
HMGA2-201ENST00000354636 HSP90B1P14625 803 aaKnown RBP30.41■■■□□ 2.46
HMGA2-201ENST00000354636 PTGER2P43116 358 aa30.41■■■□□ 2.46
HMGA2-201ENST00000354636 RIC1Q4ADV7 1423 aa30.4■■■□□ 2.46
HMGA2-201ENST00000354636 FOXO4P98177 505 aa30.4■■■□□ 2.46
HMGA2-201ENST00000354636 EPHA10Q5JZY3 1008 aa30.4■■■□□ 2.46
HMGA2-201ENST00000354636 C1orf115Q9H7X2 142 aa30.4■■■□□ 2.46
HMGA2-201ENST00000354636 BICC1Q9H694 974 aaKnown RBP30.38■■■□□ 2.45
HMGA2-201ENST00000354636 RABL6Q3YEC7 729 aaPredicted RBP30.37■■■□□ 2.45
HMGA2-201ENST00000354636 ANKRD44Q8N8A2 993 aa30.36■■■□□ 2.45
HMGA2-201ENST00000354636 NLRP3Q96P20 1036 aa30.36■■■□□ 2.45
HMGA2-201ENST00000354636 BRIP1Q9BX63 1249 aa30.36■■■□□ 2.45
HMGA2-201ENST00000354636 MYH3P11055 1940 aa30.36■■■□□ 2.45
HMGA2-201ENST00000354636 CSF1RP07333 972 aa30.35■■■□□ 2.45
HMGA2-201ENST00000354636 CTSWP56202 376 aa30.35■■■□□ 2.45
HMGA2-201ENST00000354636 ANKRD31Q8N7Z5 1873 aa30.35■■■□□ 2.45
HMGA2-201ENST00000354636 TNRC6CQ9HCJ0 1690 aaKnown RBP30.34■■■□□ 2.45
HMGA2-201ENST00000354636 C3orf67Q6ZVT6 689 aa30.34■■■□□ 2.45
HMGA2-201ENST00000354636 TTLL11Q8NHH1 800 aa30.34■■■□□ 2.45
HMGA2-201ENST00000354636 SF3B3Q15393 1217 aaKnown RBP30.33■■■□□ 2.45
HMGA2-201ENST00000354636 LMBR1LQ6UX01 489 aa30.33■■■□□ 2.45
HMGA2-201ENST00000354636 C10orf71Q711Q0 1435 aa30.33■■■□□ 2.45
HMGA2-201ENST00000354636 KLRG2A4D1S0 409 aaPredicted RBP30.32■■■□□ 2.44
HMGA2-201ENST00000354636 MTX1Q13505 466 aa30.32■■■□□ 2.44
HMGA2-201ENST00000354636 CEP85Q6P2H3 762 aa30.32■■■□□ 2.44
HMGA2-201ENST00000354636 PCDHB15Q9Y5E8 787 aa30.32■■■□□ 2.44
HMGA2-201ENST00000354636 RPAP2Q8IXW5 612 aaPredicted RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms