RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NEMFO60524 1076 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 SMC2O95347 1197 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 CLCN6P51797 869 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 NME9Q86XW9 330 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 TDRD7Q8NHU6 1098 aaKnown RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 SGSM2O43147 1006 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 PDCP20941 246 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 CCAR2Q8N163 923 aaKnown RBP8.97□□□□□ -0.97
BRCA1-201ENST00000352993 CCDC191Q8NCU4 936 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 RASSF4Q9H2L5 321 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 CLSTN2Q9H4D0 955 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 IL13P35225 146 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 ME3Q16798 604 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 ADCK5Q3MIX3 580 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 TTC14Q96N46 770 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 SH2B1Q9NRF2 756 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-201ENST00000352993 EFCAB6Q5THR3 1501 aa8.97□□□□□ -0.97
BRCA1-201ENST00000352993 URI1O94763 535 aaPredicted RBP8.96□□□□□ -0.97
BRCA1-201ENST00000352993 UBTFL1P0CB47 393 aaPredicted RBP8.96□□□□□ -0.97
BRCA1-201ENST00000352993 PNMA6AP0CW24 399 aaPredicted RBP8.96□□□□□ -0.97
BRCA1-201ENST00000352993 SSH2Q76I76 1423 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 CCDC34Q96HJ3 373 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 NPHP3Q7Z494 1330 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 RAB11FIP3O75154 756 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 ATP8B2P98198 1209 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 TXLNBQ8N3L3 684 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 RUFY2Q8WXA3 655 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 DDX11Q96FC9 970 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 COG3Q96JB2 828 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 ZCCHC17Q9NP64 241 aaKnown RBP8.96□□□□□ -0.97
BRCA1-201ENST00000352993 DNAI1Q9UI46 699 aa8.96□□□□□ -0.97
BRCA1-201ENST00000352993 KIF2AO00139 706 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-201ENST00000352993 SEC31AO94979 1220 aaKnown RBP8.96□□□□□ -0.98
BRCA1-201ENST00000352993 HSP90B1P14625 803 aaKnown RBP8.96□□□□□ -0.98
BRCA1-201ENST00000352993 LEO1Q8WVC0 666 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-201ENST00000352993 ERCC4Q92889 916 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-201ENST00000352993 TULP4Q9NRJ4 1543 aa8.96□□□□□ -0.98
BRCA1-201ENST00000352993 TULP2O00295 520 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 C11orf57Q6ZUT1 292 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 DIP2AQ14689 1571 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 MYO5BQ9ULV0 1848 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 LMAN1P49257 510 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 KIF1BPQ96EK5 621 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 LSG1Q9H089 658 aaKnown RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 SETD1AO15047 1707 aaKnown RBP8.95□□□□□ -0.98
BRCA1-201ENST00000352993 USP32Q8NFA0 1604 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 TRIM66O15016 1216 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 CCDC73Q6ZRK6 1079 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 TMC6Q7Z403 805 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 CREBRFQ8IUR6 639 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 AOPEPQ8N6M6 819 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 PNPLA6Q8IY17 1366 aa8.95□□□□□ -0.98
BRCA1-201ENST00000352993 KINO60870 393 aaKnown RBP8.94□□□□□ -0.98
BRCA1-201ENST00000352993 ST5P78524 1137 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 PTH1RQ03431 593 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SLC20A2Q08357 652 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 VPS53Q5VIR6 699 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 NYAP1Q6ZVC0 841 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 TAOK2Q9UL54 1235 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 RPGRIP1LQ68CZ1 1315 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SRGAP3O43295 1099 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SFPQP23246 707 aaKnown RBP eCLIP8.94□□□□□ -0.98
BRCA1-201ENST00000352993 OAS2P29728 719 aaKnown RBP8.94□□□□□ -0.98
BRCA1-201ENST00000352993 GTF2A1P52655 376 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-201ENST00000352993 STX1AQ16623 288 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 ZSCAN26Q16670 478 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 CHMP4CQ96CF2 233 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SDF4Q9BRK5 362 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 TPCN1Q9ULQ1 816 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.94□□□□□ -0.984e-6■■□□□ 13.9
BRCA1-201ENST00000352993 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 ZFYVE9O95405 1425 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 CHL1O00533 1208 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 PLA2G4AP47712 749 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 GYS2P54840 703 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 SMARCE1Q969G3 411 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 AK7Q96M32 723 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 STAP2Q9UGK3 403 aa8.94□□□□□ -0.98
BRCA1-201ENST00000352993 BLOC1S2Q6QNY1 142 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 CEP57L1Q8IYX8 460 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 FAM193AP78312 1265 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 FLIIQ13045 1269 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 PPP1R42Q7Z4L9 355 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 CCAR1Q8IX12 1150 aaKnown RBP8.93□□□□□ -0.98
BRCA1-201ENST00000352993 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 EPC1Q9H2F5 836 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 GSDMDP57764 484 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 CCZ1BP86790 482 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 CCZ1P86791 482 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms